Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PNKPQ96T60 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PNKPQ96T60 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PNKPQ96T60 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PNKPQ96T60 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PNKPQ96T60 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PNKPQ96T60 RPL9P7-201ENST00000330965 580 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 RNU6-933P-201ENST00000384424 107 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 Y_RNA.527-201ENST00000384573 102 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 SNORA48.5-201ENST00000391143 135 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL513475.1-201ENST00000406602 315 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AC098614.2-201ENST00000426040 255 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL353997.1-201ENST00000432936 108 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AC244505.4-201ENST00000434905 287 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.44□□□□□ -1.86
PNKPQ96T60 AL513043.1-201ENST00000439124 535 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AC011816.1-201ENST00000441346 546 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 DAP3P1-201ENST00000441522 278 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 SSXP5-201ENST00000443473 287 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 Z75741.1-201ENST00000446793 314 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 UQCRHP3-201ENST00000451503 251 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 RPL9P32-201ENST00000464118 620 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 RPL9P9-202ENST00000466501 579 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.44□□□□□ -1.86
PNKPQ96T60 ACA59.1-201ENST00000515966 143 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 RNU2-58P-201ENST00000516403 183 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AP000889.1-201ENST00000530968 660 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 CBX3P8-201ENST00000532412 525 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.44□□□□□ -1.86
PNKPQ96T60 AC092447.9-201ENST00000603395 144 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AC009314.1-201ENST00000603871 304 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL162713.1-201ENST00000604480 262 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL161629.2-201ENST00000615347 275 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.44□□□□□ -1.86
PNKPQ96T60 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.44□□□□□ -1.86
PNKPQ96T60 U6.99-201ENST00000637524 83 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
PNKPQ96T60 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PNKPQ96T60 RNU6-428P-201ENST00000362942 107 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 Y_RNA.80-201ENST00000362996 102 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 RNU6-596P-201ENST00000365395 98 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 RNU6-574P-201ENST00000384265 107 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 Y_RNA.485-201ENST00000384395 102 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 RNU4-47P-201ENST00000410876 114 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 AL117339.3-201ENST00000418733 162 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 MTATP8P1-201ENST00000467115 207 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 RPL30P5-201ENST00000494923 336 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.43□□□□□ -1.86
PNKPQ96T60 RNU6-764P-201ENST00000516396 105 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 Y_RNA.687-201ENST00000516558 91 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 MIR4273-201ENST00000582824 84 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 AL162373.1-201ENST00000620433 407 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 AC091903.1-201ENST00000624322 454 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 AL078596.1-201ENST00000624856 447 ntBASIC3.43□□□□□ -1.86
PNKPQ96T60 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PNKPQ96T60 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PNKPQ96T60 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PNKPQ96T60 RNA5SP374-201ENST00000362939 125 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 U8.8-201ENST00000365399 135 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 MIR34A-201ENST00000385130 110 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.42□□□□□ -1.86
PNKPQ96T60 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.42□□□□□ -1.86
PNKPQ96T60 RPS15AP10-201ENST00000432472 382 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.42□□□□□ -1.86
PNKPQ96T60 AC022447.4-201ENST00000504053 364 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 AC105758.1-201ENST00000506038 399 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 FTH1P9-201ENST00000513251 355 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 RNA5SP309-201ENST00000516670 106 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 FTX_3.1-201ENST00000610451 147 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.42□□□□□ -1.86
PNKPQ96T60 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PNKPQ96T60 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PNKPQ96T60 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PNKPQ96T60 Y_RNA.111-201ENST00000363248 100 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 RNU6-99P-201ENST00000364721 107 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 RNU6-217P-201ENST00000384164 104 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 Y_RNA.645-201ENST00000391229 102 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.41□□□□□ -1.86
PNKPQ96T60 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.41□□□□□ -1.86
PNKPQ96T60 MTCYBP10-201ENST00000424905 650 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 BTF3P15-201ENST00000455606 336 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC133134.1-201ENST00000466800 359 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AK3P2-201ENST00000507976 429 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 RNU6-1282P-201ENST00000516735 96 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.41□□□□□ -1.86
PNKPQ96T60 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PNKPQ96T60 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PNKPQ96T60 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.41□□□□□ -1.86
PNKPQ96T60 H3F3AP1-201ENST00000559984 334 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 SUB1P3-201ENST00000564581 315 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.41□□□□□ -1.86
PNKPQ96T60 MIR4325-201ENST00000583049 90 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms