Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RPL30P1-201ENST00000488676 339 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 Y_RNA.689-201ENST00000516589 107 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AC022022.2-201ENST00000602989 360 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AC063943.3-201ENST00000615562 356 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AL359547.2-201ENST00000615810 418 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AL159153.1-201ENST00000619688 317 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 MIR10A-201ENST00000385043 110 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 MTND4P20-201ENST00000424125 869 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AL353777.1-201ENST00000425552 326 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 RPS15AP10-201ENST00000432472 382 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AL121601.2-201ENST00000438019 707 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AL008629.1-201ENST00000438615 184 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 CR769776.1-201ENST00000441254 787 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC39Q96DD0 DUXAP8-207ENST00000456786 622 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC087477.1-201ENST00000465747 340 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC39Q96DD0 RN7SKP219-201ENST00000516825 296 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 RNU6-1003P-201ENST00000517099 105 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC103987.3-201ENST00000582071 292 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC005786.1-201ENST00000588553 154 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AP000860.1-201ENST00000605250 559 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 AC006338.1-201ENST00000618453 749 ntBASIC1.36□□□□□ -2.19
LRRC39Q96DD0 Y_RNA.46-201ENST00000362695 102 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 SNORD3E-201ENST00000362899 217 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 RNU6-433P-201ENST00000363216 104 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 RNU6-414P-201ENST00000363705 104 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 RNU4-92P-201ENST00000363783 136 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 RNA5SP99-201ENST00000364020 114 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 SNORA62.1-201ENST00000364287 154 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 SNORD14B-201ENST00000364533 90 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 RNU6-174P-201ENST00000410406 106 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AL590556.1-201ENST00000423231 483 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 MTCYBP5-201ENST00000423752 1135 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 MTATP6P15-201ENST00000527233 835 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC087441.2-201ENST00000529141 262 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AL356057.1-201ENST00000533798 831 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC097478.2-201ENST00000610572 514 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AL590240.4-201ENST00000616908 390 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.35□□□□□ -2.19
LRRC39Q96DD0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
LRRC39Q96DD0 BTF3L4P1-201ENST00000413813 468 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 RPL23AP30-201ENST00000432419 501 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 MTCYBP18-201ENST00000501056 747 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 HMGN1P13-201ENST00000505795 138 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AC023813.2-201ENST00000564321 469 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AL136363.2-201ENST00000604173 851 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AP000654.2-201ENST00000605633 586 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AC107308.1-201ENST00000615897 301 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
LRRC39Q96DD0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC39Q96DD0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
LRRC39Q96DD0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 RNA5SP213-201ENST00000391031 106 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AL357139.1-201ENST00000407792 426 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 MTND1P12-201ENST00000455231 147 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 RNU1-131P-201ENST00000458943 161 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 RPS26P55-201ENST00000471178 356 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 RPL30P12-201ENST00000474666 353 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms