Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CPEB3Q8NE35 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.89
CPEB3Q8NE35 Z75746.1-201ENST00000440243 2080 ntBASIC3.28□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.27-201ENST00000362540 103 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.358-201ENST00000365491 99 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RNU6-217P-201ENST00000384164 104 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 MIR518D-201ENST00000385014 87 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 U3.37-201ENST00000408528 213 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RPL21P38-201ENST00000418090 167 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC139712.2-201ENST00000424302 339 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AL591419.1-201ENST00000427423 339 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AL512844.2-201ENST00000433990 593 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC034236.1-201ENST00000469891 373 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RPS4XP13-201ENST00000483219 789 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC010469.2-201ENST00000496412 480 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC026402.1-201ENST00000513642 170 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RNU6-1023P-201ENST00000516137 106 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 RNU6-570P-201ENST00000517051 105 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 IGKV2D-19-201ENST00000523346 262 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 CASP1P1-201ENST00000526345 212 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AC060766.3-201ENST00000591442 263 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 U6.104-201ENST00000637979 90 ntBASIC3.27□□□□□ -1.89
CPEB3Q8NE35 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
CPEB3Q8NE35 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 MFSD8-236ENST00000641509 4050 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 MAPK10-362ENST00000641864 4484 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RNU6-778P-201ENST00000363269 103 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.458-201ENST00000384240 102 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.477-201ENST00000384352 108 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RNA5SP424-201ENST00000390988 115 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RNU6-1093P-201ENST00000391194 107 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 HMGN2P8-201ENST00000391458 268 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RN7SKP156-201ENST00000410308 342 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC098831.1-201ENST00000440661 216 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RPL39P38-201ENST00000467018 153 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC067942.3-201ENST00000512025 362 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RNU1-103P-201ENST00000516502 125 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 SNORA43.2-201ENST00000516652 128 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RNU6-1282P-201ENST00000516735 96 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AL442163.3-201ENST00000554110 156 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 RPL23AP78-201ENST00000599928 470 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AL109918.3-201ENST00000603072 338 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 AC141273.2-201ENST00000618989 130 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 SDR42E1P4-201ENST00000620894 481 ntBASIC3.26□□□□□ -1.89
CPEB3Q8NE35 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.26□□□□□ -1.89
CPEB3Q8NE35 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RNU6-942P-201ENST00000363002 107 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RNU6-658P-201ENST00000384606 106 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RPL21P75-201ENST00000396599 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RPL21P28-201ENST00000401418 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AL590556.1-201ENST00000423231 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 Z82188.1-201ENST00000436709 154 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 MTATP6P7-201ENST00000453315 681 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 MTND4LP30-201ENST00000454092 297 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 U8.22-201ENST00000459141 133 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RPL21P39-201ENST00000463605 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 TRBVB-201ENST00000477100 408 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC098869.1-201ENST00000481627 292 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC087190.1-201ENST00000484462 480 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC107032.1-201ENST00000485945 480 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC132942.1-201ENST00000486753 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC093591.1-201ENST00000491435 481 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms