Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT40Q6A162 AC004817.2-201ENST00000561794 651 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT40Q6A162 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-6P-201ENST00000606623 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 MIR7106-201ENST00000612419 65 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT40Q6A162 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KRT40Q6A162 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT40Q6A162 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT40Q6A162 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT40Q6A162 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
KRT40Q6A162 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT40Q6A162 Y_RNA.149-201ENST00000363558 117 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT40Q6A162 RNU6-823P-201ENST00000391042 103 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 SNORA48.8-201ENST00000391324 134 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT40Q6A162 RNU2-23P-201ENST00000410545 195 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 Y_RNA.623-201ENST00000411128 95 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 SNORD56-201ENST00000413522 71 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 PGBD4P6-201ENST00000421501 610 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT40Q6A162 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT40Q6A162 AC092573.2-201ENST00000434546 243 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT40Q6A162 HIGD1AP2-201ENST00000446367 280 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 NDUFB1P2-201ENST00000449477 176 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 SNRPGP3-201ENST00000469405 227 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT40Q6A162 RNA5SP290-201ENST00000517133 127 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AC023442.1-201ENST00000531247 422 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT40Q6A162 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT40Q6A162 AL158827.2-201ENST00000602494 330 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 7SK.7-201ENST00000603504 247 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AL606534.2-204ENST00000635008 178 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 AL691447.3-201ENST00000635020 330 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.7□□□□□ -1.82
KRT40Q6A162 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT40Q6A162 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT40Q6A162 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT40Q6A162 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT40Q6A162 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT40Q6A162 MIR422A-201ENST00000362286 90 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-1317P-201ENST00000364582 104 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-99P-201ENST00000364721 107 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 U8.8-201ENST00000365399 135 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-1181P-201ENST00000384191 106 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-166P-201ENST00000384371 107 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-790P-201ENST00000384479 105 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 SNORA44-201ENST00000384584 132 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 SNORA40C-201ENST00000391285 128 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 U3.42-201ENST00000408746 214 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 AL117339.3-201ENST00000418733 162 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT40Q6A162 PIGFP3-201ENST00000441918 722 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT40Q6A162 AC078918.1-201ENST00000498515 228 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 AC110794.1-201ENST00000505816 425 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-475P-201ENST00000516073 104 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU2-58P-201ENST00000516403 183 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-264P-201ENST00000517134 104 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RNU6-1073P-201ENST00000517182 106 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 AC022080.3-201ENST00000544433 482 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT40Q6A162 AC104984.5-201ENST00000586878 94 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 RPL12P50-201ENST00000603116 116 ntBASIC3.69□□□□□ -1.82
KRT40Q6A162 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT40Q6A162 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT40Q6A162 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT40Q6A162 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT40Q6A162 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
KRT40Q6A162 RNA5SP383-201ENST00000362934 120 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 Y_RNA.106-201ENST00000363189 100 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 SNORA7.2-201ENST00000364446 145 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT40Q6A162 Y_RNA.574-201ENST00000384766 95 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 RNU6-907P-201ENST00000390924 102 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AL138885.1-201ENST00000405921 675 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AL513475.1-201ENST00000406602 315 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT40Q6A162 RPL23AP22-201ENST00000437556 453 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AC099799.1-201ENST00000439809 192 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AL031274.1-201ENST00000450334 232 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 RPL17P19-201ENST00000489069 552 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 RNA5SP217-201ENST00000515959 91 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 RNU6-635P-201ENST00000516651 102 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT40Q6A162 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT40Q6A162 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT40Q6A162 AC009314.1-201ENST00000603871 304 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AP002826.1-201ENST00000608835 315 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 AC013412.1-201ENST00000610687 192 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 uc_338.25-201ENST00000613756 156 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms