Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AL451074.5-201ENST00000415894 435 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.92□□□□□ -1.78
EPHB3P54753 AL591043.1-201ENST00000432461 424 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.92□□□□□ -1.78
EPHB3P54753 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.92□□□□□ -1.78
EPHB3P54753 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.92□□□□□ -1.78
EPHB3P54753 RNU6-861P-201ENST00000516745 106 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 RNU6-612P-201ENST00000516909 102 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.92□□□□□ -1.78
EPHB3P54753 AP006245.1-201ENST00000522549 120 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
EPHB3P54753 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.92□□□□□ -1.78
EPHB3P54753 RPL23AP78-201ENST00000599928 470 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AL137849.1-201ENST00000604767 169 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AC240442.1-201ENST00000616055 283 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AL360181.4-201ENST00000621752 134 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 MIR4727-201ENST00000622232 55 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
EPHB3P54753 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
EPHB3P54753 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
EPHB3P54753 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
EPHB3P54753 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
EPHB3P54753 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
EPHB3P54753 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.122-201ENST00000363331 96 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 RNU6-704P-201ENST00000364162 103 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 RNU6-512P-201ENST00000364438 103 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 SNORA7.2-201ENST00000364446 145 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 SNORD14B-201ENST00000364533 90 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.405-201ENST00000383979 100 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.451-201ENST00000384200 100 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.524-201ENST00000384564 100 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.561-201ENST00000384694 100 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
EPHB3P54753 Y_RNA.602-201ENST00000410535 92 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 RNU6-1025P-201ENST00000410629 104 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.91□□□□□ -1.78
EPHB3P54753 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.91□□□□□ -1.78
EPHB3P54753 AL158156.1-201ENST00000422509 473 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 PIGFP3-201ENST00000441918 722 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
EPHB3P54753 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.91□□□□□ -1.78
EPHB3P54753 RPS29P26-201ENST00000477483 171 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 MRPL42P6-201ENST00000486397 371 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 ANXA2P1-201ENST00000505539 926 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC074198.2-201ENST00000508153 258 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 RNU6-1278P-201ENST00000516130 107 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC109479.2-201ENST00000517842 174 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
EPHB3P54753 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.91□□□□□ -1.78
EPHB3P54753 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.91□□□□□ -1.78
EPHB3P54753 AC090877.1-201ENST00000561418 344 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.91□□□□□ -1.78
EPHB3P54753 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.91□□□□□ -1.78
EPHB3P54753 SRGNP1-201ENST00000603392 451 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AL161798.1-201ENST00000604630 131 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC072026.1-201ENST00000605023 201 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC073657.2-201ENST00000605661 303 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 AC021753.1-201ENST00000635724 168 ntBASIC3.91□□□□□ -1.78
EPHB3P54753 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
EPHB3P54753 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
EPHB3P54753 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
EPHB3P54753 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
EPHB3P54753 MAPK10-373ENST00000641983 6772 ntBASIC3.9□□□□□ -1.78
EPHB3P54753 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
EPHB3P54753 AC116096.1-201ENST00000566804 2314 ntBASIC3.9□□□□□ -1.78
EPHB3P54753 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
EPHB3P54753 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
EPHB3P54753 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.9□□□□□ -1.79
EPHB3P54753 RNU6-1167P-201ENST00000363227 94 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 Y_RNA.333-201ENST00000365274 102 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 RNY4P28-201ENST00000365281 93 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 SNORD63-201ENST00000384262 68 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 RNU6-1081P-201ENST00000384537 107 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 MIR23A-201ENST00000385245 73 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 SNORD78.2-201ENST00000391076 69 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EPHB3P54753 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 Y_RNA.626-201ENST00000411288 95 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.9□□□□□ -1.79
EPHB3P54753 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.9□□□□□ -1.79
EPHB3P54753 HSPE1P25-201ENST00000455484 251 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 U8.22-201ENST00000459141 133 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 HSPE1P6-201ENST00000479457 291 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AC005921.1-201ENST00000510589 286 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 Y_RNA.706-201ENST00000516933 99 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.9□□□□□ -1.79
EPHB3P54753 AC103996.1-201ENST00000555468 102 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.9□□□□□ -1.79
EPHB3P54753 AC005046.1-201ENST00000608515 625 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AC004832.4-201ENST00000608952 331 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AL161629.2-201ENST00000615347 275 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 AC097372.5-201ENST00000623665 376 ntBASIC3.9□□□□□ -1.79
EPHB3P54753 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
EPHB3P54753 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms