Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 MTCO3P45-201ENST00000443036 613 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 FTH1P25-201ENST00000447665 469 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RPS24P6-201ENST00000452670 400 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RPL31P13-201ENST00000484151 370 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC104564.1-201ENST00000493028 407 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC022493.2-201ENST00000506122 481 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC092436.3-201ENST00000511788 257 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 IGHV3-76-201ENST00000522465 295 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AP006587.4-201ENST00000526053 529 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC092447.9-201ENST00000603395 144 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RNA5SP108-201ENST00000605921 117 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC006329.2-201ENST00000611491 394 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 U2.1-201ENST00000618978 145 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 ZNF72P-201ENST00000425869 1908 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AC005592.1-201ENST00000566527 1640 ntBASIC3.15□□□□□ -1.9
SNHG28P0DPA3 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 SNORA31-201ENST00000362607 130 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNU6-593P-201ENST00000364716 112 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNA5SP189-201ENST00000364920 115 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNU6-637P-201ENST00000384050 107 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNU6-393P-201ENST00000384475 107 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 MIR34A-201ENST00000385130 110 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AL109755.1-201ENST00000401791 649 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RPS4XP7-201ENST00000406274 780 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNU2-52P-201ENST00000410680 190 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RPL21P24-201ENST00000413752 448 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RPL31P2-201ENST00000413849 377 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 SNAP23P1-201ENST00000433229 246 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AL353752.1-201ENST00000454946 260 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RPL23AP31-201ENST00000456160 467 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 SNORD5.1-201ENST00000458800 75 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RNU7-167P-201ENST00000459160 62 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 SNORD97-201ENST00000459187 142 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC022447.4-201ENST00000504053 364 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 MRPS35P2-201ENST00000508242 191 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC006445.2-201ENST00000510061 472 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RN7SKP277-201ENST00000516895 283 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AP000889.1-201ENST00000530968 660 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC005046.1-201ENST00000608515 625 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC099778.2-201ENST00000610904 211 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
SNHG28P0DPA3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNHG28P0DPA3 RPL9P7-201ENST00000330965 580 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNA5SP295-201ENST00000362655 121 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNU6-859P-201ENST00000362728 107 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNU6-490P-201ENST00000362985 107 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 MIR135A2-201ENST00000384854 100 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 MT-TW-201ENST00000387382 68 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNU7-187P-201ENST00000458985 68 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RPL22P13-201ENST00000493291 347 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AP005902.1-201ENST00000521358 186 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 RNU6-323P-201ENST00000521915 107 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC100870.1-201ENST00000522035 505 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 OR5D17P-201ENST00000531492 978 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC012669.1-201ENST00000603209 283 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC016727.2-201ENST00000603988 621 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC062037.2-201ENST00000610137 73 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AL161423.1-201ENST00000613700 262 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC133104.2-201ENST00000615272 193 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC007998.5-201ENST00000622938 237 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC011978.2-201ENST00000569835 2054 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC007256.1-201ENST00000392253 2765 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 AC108206.1-201ENST00000570186 4159 ntBASIC3.14□□□□□ -1.91
SNHG28P0DPA3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNHG28P0DPA3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms