Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC53A6NM62 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC53A6NM62 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC53A6NM62 Y_RNA.157-201ENST00000363638 102 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 SNORA25.6-201ENST00000364121 118 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC53A6NM62 RNU6-748P-201ENST00000384648 107 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 U3.26-201ENST00000391236 204 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AL162578.1-201ENST00000406202 378 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC011816.1-201ENST00000441346 546 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 RNU7-138P-201ENST00000459479 64 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC007547.1-201ENST00000462177 490 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC133134.1-201ENST00000466800 359 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC008571.1-201ENST00000467232 300 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 SEM1P1-201ENST00000506694 209 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC098799.2-201ENST00000509466 868 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 FAM206BP-201ENST00000510179 541 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 OR1M4P-201ENST00000589199 287 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC019159.1-201ENST00000605094 187 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 AC138627.2-201ENST00000624202 601 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 U4.7-201ENST00000638126 106 ntBASIC2.81□□□□□ -1.96
LRRC53A6NM62 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LRRC53A6NM62 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC53A6NM62 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC53A6NM62 Y_RNA.86-201ENST00000363020 111 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 RNU6-1252P-201ENST00000363054 104 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 SNORD46.1-201ENST00000364139 104 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 RNU6-1283P-201ENST00000365314 105 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 SNORD73A-201ENST00000386062 65 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 RNU6-1328P-201ENST00000410938 106 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 USP9YP20-201ENST00000419224 558 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AL031274.1-201ENST00000450334 232 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 RNU7-66P-201ENST00000459469 62 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 SRIP1-201ENST00000489235 288 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 MTCYBP40-201ENST00000509390 1135 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AL117351.2-201ENST00000513571 157 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 SCARNA11.3-201ENST00000517276 130 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 CKS1BP7-201ENST00000522230 235 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC53A6NM62 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AC060780.3-201ENST00000589464 80 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
LRRC53A6NM62 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC53A6NM62 AC073346.2-201ENST00000624724 2058 ntBASIC2.8□□□□□ -1.96
LRRC53A6NM62 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC53A6NM62 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC53A6NM62 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC53A6NM62 RNU6-254P-201ENST00000363377 107 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 SNORA68.1-201ENST00000364537 132 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 AL513185.2-201ENST00000425543 193 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 AL365400.1-201ENST00000431854 640 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 RPS27P27-201ENST00000498779 255 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 RNU6-1314P-201ENST00000517139 104 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 AC087854.1-201ENST00000519706 414 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 AP005597.4-201ENST00000526762 229 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 AC025423.5-201ENST00000550230 219 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 PSMA3P-201ENST00000555485 635 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 AP000787.2-201ENST00000604432 568 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 FAM157A-202ENST00000615155 405 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC53A6NM62 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 RBBP8P1-201ENST00000449447 1844 ntBASIC2.79□□□□□ -1.96
LRRC53A6NM62 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.79□□□□□ -1.96
LRRC53A6NM62 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC53A6NM62 CASC19-280ENST00000642102 1351 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC53A6NM62 RNU6-428P-201ENST00000362942 107 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 Y_RNA.100-201ENST00000363141 102 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC53A6NM62 RNU6-843P-201ENST00000384454 104 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 MIR450B-201ENST00000401182 78 ntBASIC2.78□□□□□ -1.96
LRRC53A6NM62 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.78□□□□□ -1.96
LRRC53A6NM62 AC074117.2-201ENST00000417130 397 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms