Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Mre11Q61216 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Gm7290-201ENSMUST00000104990 617 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Gm12918-201ENSMUST00000120234 636 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Gm15710-201ENSMUST00000121821 636 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Mre11Q61216 Gm5075-201ENSMUST00000196916 622 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.43■□□□□ 0.7
Mre11Q61216 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.43■□□□□ 0.7
Mre11Q61216 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.42■□□□□ 0.7
Mre11Q61216 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
Mre11Q61216 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Gm26524-201ENSMUST00000192339 390 ntBASIC19.42■□□□□ 0.7
Mre11Q61216 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mre11Q61216 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.41■□□□□ 0.7
Mre11Q61216 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.41■□□□□ 0.7
Mre11Q61216 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Mre11Q61216 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mre11Q61216 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Gm37025-201ENSMUST00000195159 829 ntBASIC19.4■□□□□ 0.7
Mre11Q61216 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.4■□□□□ 0.7
Mre11Q61216 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.4■□□□□ 0.7
Mre11Q61216 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Mre11Q61216 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mre11Q61216 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mre11Q61216 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mre11Q61216 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mre11Q61216 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Mre11Q61216 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.39■□□□□ 0.69
Mre11Q61216 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.39■□□□□ 0.69
Mre11Q61216 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.39■□□□□ 0.69
Mre11Q61216 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Mre11Q61216 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mre11Q61216 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms