Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RhoP15409 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RhoP15409 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RhoP15409 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RhoP15409 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RhoP15409 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RhoP15409 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Gm12260-201ENSMUST00000122447 411 ntBASIC16.29■□□□□ 0.2
RhoP15409 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.29■□□□□ 0.2
RhoP15409 Gm2213-201ENSMUST00000197485 688 ntBASIC16.29■□□□□ 0.2
RhoP15409 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.29■□□□□ 0.2
RhoP15409 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RhoP15409 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RhoP15409 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RhoP15409 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RhoP15409 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RhoP15409 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RhoP15409 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RhoP15409 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.28■□□□□ 0.2
RhoP15409 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm8825-201ENSMUST00000182565 998 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm4518-201ENSMUST00000182638 718 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm27646-201ENSMUST00000183989 110 ntBASIC16.28■□□□□ 0.2
RhoP15409 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.28■□□□□ 0.2
RhoP15409 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.28■□□□□ 0.2
RhoP15409 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.28■□□□□ 0.2
RhoP15409 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.28■□□□□ 0.2
RhoP15409 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RhoP15409 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RhoP15409 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.28■□□□□ 0.2
RhoP15409 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.28■□□□□ 0.2
RhoP15409 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.28■□□□□ 0.2
RhoP15409 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.28■□□□□ 0.2
RhoP15409 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RhoP15409 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.27■□□□□ 0.2
RhoP15409 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Gm9727-201ENSMUST00000161387 555 ntBASIC16.27■□□□□ 0.2
RhoP15409 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RhoP15409 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.27■□□□□ 0.2
RhoP15409 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.27■□□□□ 0.2
RhoP15409 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RhoP15409 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RhoP15409 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RhoP15409 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RhoP15409 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RhoP15409 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RhoP15409 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.27■□□□□ 0.19
RhoP15409 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RhoP15409 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms