Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 PHKBP1-201ENST00000450951 1951 ntBASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC61Q9Y6R9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 RNU6-978P-201ENST00000364371 103 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 SNORA72-201ENST00000384339 132 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 RN7SL585P-201ENST00000470538 280 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 AC091167.1-201ENST00000492017 396 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 MRPS36P2-201ENST00000512569 299 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 AC134698.5-201ENST00000519444 336 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 CYCSP39-201ENST00000565821 309 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 SNRPGP20-201ENST00000604477 205 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 ARF4P1-201ENST00000605447 541 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 AL023881.1-201ENST00000621088 301 ntBASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC61Q9Y6R9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 STX3-208ENST00000641815 3236 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 AC073136.1-201ENST00000449426 2884 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 MIR494-201ENST00000349529 81 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 RNU6-309P-201ENST00000364573 106 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 SNORA70C-201ENST00000384538 135 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 MIR549A-201ENST00000385268 96 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 SNORA57.1-201ENST00000391227 145 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 RPL23AP14-201ENST00000468281 468 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 RPL31P41-201ENST00000477967 372 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 AC015914.2-201ENST00000618167 288 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 AL136164.3-201ENST00000624429 3978 ntBASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC61Q9Y6R9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 Y_RNA.243-201ENST00000364481 109 ntBASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 AC010469.1-201ENST00000463864 576 ntBASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 KC877373.1-201ENST00000479066 408 ntBASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 AC020895.1-201ENST00000595362 272 ntBASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC61Q9Y6R9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 RNA5SP28-201ENST00000363841 119 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.415-201ENST00000384012 112 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 RNA5SP225-201ENST00000410874 135 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 EIF4HP2-201ENST00000424380 563 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 AL691449.1-201ENST00000426570 421 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 RPL26P9-201ENST00000457466 433 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 RMST_8.1-201ENST00000610287 165 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 A2MP1-204ENST00000566278 4130 ntBASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC61Q9Y6R9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RNA5SP388-201ENST00000362584 119 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RNA5SP366-201ENST00000365454 123 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 AC104333.2-201ENST00000422630 192 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RPS4XP2-201ENST00000458402 793 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RPL21P10-201ENST00000463521 490 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RNA5SP154-201ENST00000516193 111 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-1183P-201ENST00000517054 60 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 CYCSP40-201ENST00000575927 294 ntBASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms