Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNU6-2-201ENST00000384627 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-29P-201ENST00000384637 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-9-201ENST00000384776 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-33P-201ENST00000384793 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 MIR493-201ENST00000385254 89 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 MIR325-201ENST00000385260 98 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.53□□□□□ -1.84
PNKPQ96T60 USMG5P1-201ENST00000425964 177 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.53□□□□□ -1.84
PNKPQ96T60 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.53□□□□□ -1.84
PNKPQ96T60 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.53□□□□□ -1.84
PNKPQ96T60 RPL31P13-201ENST00000484151 370 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RN7SL283P-201ENST00000489055 303 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 AC005921.1-201ENST00000510589 286 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 NDUFB4P9-201ENST00000511646 388 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-470P-201ENST00000515954 104 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-699P-201ENST00000517081 110 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNA5SP165-201ENST00000517142 115 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
PNKPQ96T60 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.53□□□□□ -1.84
PNKPQ96T60 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.53□□□□□ -1.84
PNKPQ96T60 BNIP3P16-201ENST00000589779 534 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 RNU6-6P-201ENST00000606623 107 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 AC083806.3-201ENST00000614016 455 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.53□□□□□ -1.84
PNKPQ96T60 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
PNKPQ96T60 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PNKPQ96T60 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.85
PNKPQ96T60 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PNKPQ96T60 AC017071.1-201ENST00000564407 2204 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
PNKPQ96T60 NDUFB4P4-201ENST00000404822 243 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AL030996.1-201ENST00000411430 235 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 MCFD2P1-201ENST00000417812 300 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.52□□□□□ -1.85
PNKPQ96T60 AL590383.1-201ENST00000428602 75 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 FTH1P6-201ENST00000430768 320 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.52□□□□□ -1.85
PNKPQ96T60 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.52□□□□□ -1.85
PNKPQ96T60 PCMTD1P1-201ENST00000455560 355 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 RPS29P2-201ENST00000479278 136 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC022493.2-201ENST00000506122 481 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC113155.1-201ENST00000511141 769 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 RNA5SP291-201ENST00000517222 105 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 TRAV28-201ENST00000557548 323 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.52□□□□□ -1.85
PNKPQ96T60 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PNKPQ96T60 AP000942.4-201ENST00000604811 241 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC004805.2-201ENST00000605382 482 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AL121917.1-203ENST00000605534 577 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 MIR7112-201ENST00000616126 65 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 MIR8057-201ENST00000620957 69 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AF117829.1-206ENST00000621883 3802 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AC138627.2-201ENST00000624202 601 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.52□□□□□ -1.85
PNKPQ96T60 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.52□□□□□ -1.85
PNKPQ96T60 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PNKPQ96T60 AC007785.2-201ENST00000598627 1916 ntBASIC3.52□□□□□ -1.85
PNKPQ96T60 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PNKPQ96T60 Z83843.1-201ENST00000604070 3685 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PNKPQ96T60 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PNKPQ96T60 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PNKPQ96T60 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PNKPQ96T60 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PNKPQ96T60 RNA5SP197-201ENST00000363357 119 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 SNORD14B-201ENST00000364533 90 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 RNA5SP189-201ENST00000364920 115 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 RNA5SP167-201ENST00000365461 116 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 Y_RNA.496-201ENST00000384444 101 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 Y_RNA.623-201ENST00000411128 95 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.51□□□□□ -1.85
PNKPQ96T60 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.51□□□□□ -1.85
PNKPQ96T60 AC243428.1-201ENST00000421099 264 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.51□□□□□ -1.85
PNKPQ96T60 AC093151.1-201ENST00000427711 313 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.51□□□□□ -1.85
PNKPQ96T60 AC109446.1-201ENST00000566172 220 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AC136601.2-201ENST00000604356 474 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AC008121.3-201ENST00000618726 433 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 AC091925.1-201ENST00000623204 462 ntBASIC3.51□□□□□ -1.85
PNKPQ96T60 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.51□□□□□ -1.85
PNKPQ96T60 AC008264.2-201ENST00000610193 3731 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PNKPQ96T60 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PNKPQ96T60 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PNKPQ96T60 Y_RNA.252-201ENST00000364556 101 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 RNU6-790P-201ENST00000384479 105 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PNKPQ96T60 SNORA48.2-201ENST00000390926 124 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 RNU6-325P-201ENST00000411132 105 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AL096701.2-201ENST00000416920 238 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC007560.1-201ENST00000426912 237 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms