Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RPL7P47-201ENST00000497299 556 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 VWA8P1-201ENST00000510889 176 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 IGLV3-26-201ENST00000520756 302 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 AC025627.2-201ENST00000576220 160 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 AC024153.1-201ENST00000603103 365 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 BRDTP1-201ENST00000605735 677 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 AC034229.5-201ENST00000624258 185 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 U6.106-201ENST00000636360 105 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 U6.99-201ENST00000637524 83 ntBASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC85AQ96PX6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RNU1-15P-201ENST00000353977 144 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RNA5SP124-201ENST00000362739 110 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RNU6-740P-201ENST00000364734 105 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RNU6-318P-201ENST00000384283 103 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 MIR32-201ENST00000384965 70 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 Y_RNA.590-201ENST00000410140 107 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 AL390729.2-201ENST00000416137 156 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RPL23AP65-201ENST00000475608 468 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 Y_RNA.679-201ENST00000516416 91 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 AP004607.1-201ENST00000524456 203 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 AC039056.2-201ENST00000622261 511 ntBASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC85AQ96PX6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 MAPK10-320ENST00000641462 6696 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 RNU6-858P-201ENST00000362436 107 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 UBA52P6-201ENST00000399822 382 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 RNU2-61P-201ENST00000411069 191 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 RNU6-1245P-201ENST00000411130 106 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 AC011742.1-201ENST00000431448 434 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 SNRPEP9-201ENST00000436794 238 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 RPS29P26-201ENST00000477483 171 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 RPL29P14-201ENST00000495837 428 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 SNRPGP15-201ENST00000600149 222 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 LINC01355-201ENST00000566551 5444 ntBASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85AQ96PX6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 Y_RNA.275-201ENST00000364726 110 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 SNORD50.2-201ENST00000365465 70 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 MIR30B-201ENST00000384850 88 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 SNORD12B-201ENST00000410433 91 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 CYCSP32-201ENST00000440548 321 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 snoU13.4-201ENST00000458916 104 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 RPL30P1-201ENST00000488676 339 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 HMGB1P22-201ENST00000505315 124 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 SNORA43.2-201ENST00000516652 128 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 RNU7-143P-201ENST00000516781 65 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 RNA5SP143-201ENST00000516936 115 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 AC016256.1-201ENST00000547971 354 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 AC107016.1-201ENST00000550463 337 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 uc_338.32-201ENST00000615087 172 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 AL354798.1-201ENST00000622505 329 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 AC241585.2-209ENST00000638217 143 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 AC008568.2-201ENST00000623862 2313 ntBASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85AQ96PX6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 Y_RNA.170-201ENST00000363746 110 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RNU6-142P-201ENST00000384019 107 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RNU6-213P-201ENST00000384051 104 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RNU6-1081P-201ENST00000384537 107 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RNU6-541P-201ENST00000384709 110 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 RNA5SP31-201ENST00000411144 127 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 Z82210.1-201ENST00000440037 231 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AC009237.8-201ENST00000445492 379 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AL500522.2-201ENST00000448562 343 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AC007395.1-201ENST00000451333 677 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AC073901.1-201ENST00000462471 408 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AP000870.1-201ENST00000472927 406 ntBASIC5.02□□□□□ -1.61
CCDC85AQ96PX6 AC074198.2-201ENST00000508153 258 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms