Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 AL445567.1-201ENST00000439121 144 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 AL590365.1-201ENST00000450788 243 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 RPL26P9-201ENST00000457466 433 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN4AP35499 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 RNU6-64P-201ENST00000517119 105 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 SNORA31.23-201ENST00000517219 133 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 AL157871.3-201ENST00000557231 293 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 MIR3609-201ENST00000582661 80 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN4AP35499 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.69□□□□□ -2.14
SCN4AP35499 AC012640.5-201ENST00000623897 319 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 AC097655.1-201ENST00000635075 318 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.69□□□□□ -2.14
SCN4AP35499 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN4AP35499 MTND4P16-201ENST00000466108 1367 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-884P-201ENST00000363889 107 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU5A-8P-201ENST00000364102 114 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU1-52P-201ENST00000384190 164 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU2-8P-201ENST00000410727 190 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-1328P-201ENST00000410938 106 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC009518.2-201ENST00000418056 731 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC098831.1-201ENST00000440661 216 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU7-23P-201ENST00000459465 62 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC109329.1-201ENST00000518744 317 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.68□□□□□ -2.14
SCN4AP35499 MIR4782-201ENST00000577987 79 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 Z99497.2-201ENST00000603634 310 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC013553.2-201ENST00000604244 589 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 MIR15A-201ENST00000607334 83 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC008498.1-201ENST00000613012 531 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC130324.3-201ENST00000614165 542 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC017037.3-201ENST00000625016 472 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AP003399.1-201ENST00000637534 361 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN4AP35499 AL137003.2-201ENST00000606924 2538 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-1167P-201ENST00000363227 94 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-1032P-201ENST00000384100 107 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 MTCYBP36-201ENST00000404146 440 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RPS12P24-201ENST00000412619 387 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC013267.1-201ENST00000458227 267 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 MTND5P13-201ENST00000513046 1079 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-581P-201ENST00000516214 105 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-759P-201ENST00000516740 103 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.68□□□□□ -2.14
SCN4AP35499 AL359212.1-201ENST00000556608 614 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN4AP35499 AC023824.2-201ENST00000566185 400 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AF038458.1-201ENST00000588406 262 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 AL355877.2-201ENST00000603670 358 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 AP000811.1-201ENST00000603803 651 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN4AP35499 TUG1_2.1-201ENST00000614234 87 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 uc_338.11-201ENST00000619132 160 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SCN4AP35499 AP000560.1-201ENST00000624150 1937 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 CDC27P3-201ENST00000635418 1910 ntBASIC1.68□□□□□ -2.14
SCN4AP35499 RNU6-946P-201ENST00000383878 107 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AL359634.1-202ENST00000404721 284 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC023141.4-201ENST00000412031 328 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN4AP35499 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN4AP35499 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN4AP35499 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN4AP35499 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 MTND4P25-201ENST00000441039 533 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN4AP35499 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SCN4AP35499 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN4AP35499 AC007229.1-201ENST00000590455 412 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC005261.5-201ENST00000596280 355 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN4AP35499 AC006338.1-201ENST00000618453 749 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 AC091895.1-201ENST00000624494 256 ntBASIC1.67□□□□□ -2.14
SCN4AP35499 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN4AP35499 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms