Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL365204.3-201ENST00000612448 685 ntBASIC2.24□□□□□ -2.05
HDAC3O15379 AC012409.4-201ENST00000612923 249 ntBASIC2.24□□□□□ -2.05
HDAC3O15379 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HDAC3O15379 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.24□□□□□ -2.05
HDAC3O15379 AC007998.5-201ENST00000622938 237 ntBASIC2.24□□□□□ -2.05
HDAC3O15379 AC011155.2-201ENST00000623202 216 ntBASIC2.24□□□□□ -2.05
HDAC3O15379 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.24□□□□□ -2.05
HDAC3O15379 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.24□□□□□ -2.05
HDAC3O15379 MTND5P42-201ENST00000637720 498 ntBASIC2.24□□□□□ -2.05
HDAC3O15379 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HDAC3O15379 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HDAC3O15379 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.24□□□□□ -2.05
HDAC3O15379 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HDAC3O15379 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC3O15379 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.23□□□□□ -2.05
HDAC3O15379 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC3O15379 RNU6-179P-201ENST00000363350 107 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 Y_RNA.295-201ENST00000364918 102 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 SNORD115-7-201ENST00000365306 82 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 RNU4-48P-201ENST00000365559 182 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 RNU6-1029P-201ENST00000384109 107 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 Y_RNA.576-201ENST00000384781 102 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 RNU6-817P-201ENST00000391083 104 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 SNORD23.1-201ENST00000408212 104 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 RNU2-33P-201ENST00000410344 192 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.23□□□□□ -2.05
HDAC3O15379 MTCYBP8-201ENST00000422855 651 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 CALM2P2-201ENST00000428512 440 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 MTCO2P3-201ENST00000442543 421 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AC009237.8-201ENST00000445492 379 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 DPPA3P1-201ENST00000448050 469 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AL118520.1-201ENST00000450770 291 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC3O15379 AC083798.1-201ENST00000472671 131 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.23□□□□□ -2.05
HDAC3O15379 MTCO3P9-201ENST00000506989 781 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC3O15379 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.23□□□□□ -2.05
HDAC3O15379 RNU6-123P-201ENST00000516163 102 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC3O15379 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.23□□□□□ -2.05
HDAC3O15379 AC068135.2-201ENST00000569293 1028 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC3O15379 AC008521.1-201ENST00000587471 187 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AL355877.2-201ENST00000603670 358 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 RMST_3.1-201ENST00000611651 109 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
HDAC3O15379 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC3O15379 AC002553.4-201ENST00000616896 331 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 FRG1KP-201ENST00000623592 341 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 MTND1P37-201ENST00000636562 264 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC3O15379 CKAP2P1-201ENST00000555477 2049 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 AC004520.1-201ENST00000608362 1413 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC3O15379 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.23□□□□□ -2.05
HDAC3O15379 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC3O15379 AC007785.2-201ENST00000598627 1916 ntBASIC2.23□□□□□ -2.05
HDAC3O15379 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.23□□□□□ -2.05
HDAC3O15379 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 UBE2L2-201ENST00000254302 429 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HDAC3O15379 AC062016.1-201ENST00000355719 319 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-451P-201ENST00000362921 107 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-1167P-201ENST00000363227 94 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-1322P-201ENST00000364309 107 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-512P-201ENST00000364438 103 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-741P-201ENST00000383889 107 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 SNORA69-201ENST00000383895 132 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 Y_RNA.534-201ENST00000384599 112 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU6-1068P-201ENST00000410958 103 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 OR51A5P-201ENST00000415429 942 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.22□□□□□ -2.05
HDAC3O15379 AL592045.1-201ENST00000429867 352 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC073415.1-201ENST00000449240 153 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC108938.1-201ENST00000451204 136 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AL356010.1-201ENST00000456364 102 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 RNU7-63P-201ENST00000459054 62 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC3O15379 RNA5SP401-201ENST00000515920 127 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 Y_RNA.689-201ENST00000516589 107 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC3O15379 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AL512310.1-201ENST00000548639 172 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 MIR5583-1-201ENST00000580941 59 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.22□□□□□ -2.05
HDAC3O15379 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms