Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 SCARNA13-201ENST00000516672 275 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 RNU6-307P-201ENST00000516743 106 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 SNORA31.23-201ENST00000517219 133 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 AC009812.2-201ENST00000517657 457 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 AP000889.1-201ENST00000530968 660 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
MBD3L3A6NE82 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.16□□□□□ -1.9
MBD3L3A6NE82 MTCO3P13-201ENST00000577757 781 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 MIR4273-201ENST00000582824 84 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 AC006077.1-201ENST00000604746 343 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 BRDTP1-201ENST00000605735 677 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L3A6NE82 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
MBD3L3A6NE82 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
MBD3L3A6NE82 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RNU6-890P-201ENST00000384121 107 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RNU6-331P-201ENST00000384724 107 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AL133475.1-201ENST00000404414 305 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AL138878.1-201ENST00000405131 347 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RN7SKP111-201ENST00000410349 271 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RNA5SP39-201ENST00000411245 120 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC243964.1-201ENST00000441814 261 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 ELOCP24-201ENST00000456370 334 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 FO393415.2-201ENST00000480085 343 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RPS26P15-201ENST00000488067 348 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 SCARNA16.2-201ENST00000516520 172 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC093249.1-201ENST00000567049 203 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 MIR3200-201ENST00000580767 85 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC103858.2-201ENST00000621471 543 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 AC092608.2-201ENST00000624427 218 ntBASIC3.15□□□□□ -1.91
MBD3L3A6NE82 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L3A6NE82 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 MTND5P10-201ENST00000603719 1809 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 MFSD8-233ENST00000641482 4860 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 Y_RNA.187-201ENST00000363918 113 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 U3.39-201ENST00000408569 239 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 RPL31P12-201ENST00000422587 358 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 RN7SL601P-201ENST00000471221 293 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 RNA5SP384-201ENST00000516615 116 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 KLKP1-201ENST00000595979 403 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC078795.3-201ENST00000602913 472 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AP001836.1-201ENST00000604675 523 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 UCA1.1-201ENST00000620952 75 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L3A6NE82 AC008669.1-201ENST00000565823 2178 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
MBD3L3A6NE82 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MBD3L3A6NE82 HAUS6P2-201ENST00000433254 2404 ntBASIC3.13□□□□□ -1.91
MBD3L3A6NE82 MIR369-201ENST00000362155 70 ntBASIC3.13□□□□□ -1.91
MBD3L3A6NE82 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
MBD3L3A6NE82 Y_RNA.123-201ENST00000363338 102 ntBASIC3.13□□□□□ -1.91
MBD3L3A6NE82 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms