Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC069439.1-201ENST00000494739 167 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC092747.3-201ENST00000603769 301 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC091152.3-201ENST00000604227 325 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC068944.2-201ENST00000610373 403 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AL162274.2-201ENST00000614406 332 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC002553.4-201ENST00000616896 331 ntBASIC2.91□□□□□ -1.94
LRRC53A6NM62 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
LRRC53A6NM62 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
LRRC53A6NM62 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 RNU6-82P-201ENST00000363970 107 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 RNU1-112P-201ENST00000364401 164 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 Y_RNA.480-201ENST00000384364 102 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AL122016.1-201ENST00000403365 367 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC096649.2-201ENST00000416186 393 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 SRIP2-201ENST00000428470 166 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 AL590639.1-201ENST00000456484 337 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 RNU6-1208P-201ENST00000459588 107 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 Y_RNA.654-201ENST00000497848 106 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 HIGD1AP13-201ENST00000509878 289 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 RNU6-189P-201ENST00000516120 101 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC007151.1-201ENST00000572774 483 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 SNORA59B-202ENST00000578183 701 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 Z82243.1-201ENST00000609432 473 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.9□□□□□ -1.95
LRRC53A6NM62 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
LRRC53A6NM62 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC53A6NM62 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC53A6NM62 RNU6-942P-201ENST00000363002 107 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AL138827.1-201ENST00000402666 306 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 FTH1P15-201ENST00000406984 280 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 RPLP0P7-201ENST00000416050 667 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 TOMM20P4-201ENST00000427861 435 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 USP9YP28-201ENST00000435142 589 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC009296.1-201ENST00000443146 155 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 HMGN2P26-201ENST00000463169 339 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 RPL31P41-201ENST00000477967 372 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 MTCYBP18-201ENST00000501056 747 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 SNORD19.2-201ENST00000516978 73 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC004944.1-201ENST00000517807 3059 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC011471.1-201ENST00000585766 187 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC123912.5-201ENST00000605470 343 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC53A6NM62 AC103705.1-201ENST00000619013 241 ntBASIC2.89□□□□□ -1.95
LRRC53A6NM62 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC53A6NM62 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRC53A6NM62 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LRRC53A6NM62 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRC53A6NM62 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 RNU1-140P-201ENST00000365040 165 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 SNORA11-201ENST00000408789 128 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AL358075.3-201ENST00000426289 226 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 HIGD1AP2-201ENST00000446367 280 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 AC117503.1-201ENST00000472241 394 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AC083904.1-201ENST00000487828 231 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AF213884.2-201ENST00000510417 903 ntBASIC2.88□□□□□ -1.95
LRRC53A6NM62 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC53A6NM62 AC114781.4-201ENST00000513707 639 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms