Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC126118.1-201ENST00000607744 628 ntBASIC1.72□□□□□ -2.13
CCNB1IP1Q9NPC3 uc_338.15-201ENST00000615470 191 ntBASIC1.72□□□□□ -2.13
CCNB1IP1Q9NPC3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CCNB1IP1Q9NPC3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCNB1IP1Q9NPC3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.13
CCNB1IP1Q9NPC3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 MIR412-201ENST00000362142 91 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 RNU6-72P-201ENST00000384285 79 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 RPL22P18-201ENST00000417197 377 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 MTAPP1-201ENST00000489154 819 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 HMGB1P30-201ENST00000492455 606 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC011979.2-201ENST00000527568 352 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AP000763.2-201ENST00000540641 163 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC007375.1-201ENST00000554513 578 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 MIR3118-1-201ENST00000581787 76 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 CLIC4P2-201ENST00000601934 717 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC121334.2-201ENST00000605387 271 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AC024940.5-201ENST00000622889 474 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 AL445523.1-201ENST00000451184 1362 ntBASIC1.71□□□□□ -2.14
CCNB1IP1Q9NPC3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 RNU6-529P-201ENST00000363383 104 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 RNA5SP126-201ENST00000365092 109 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 MIR29C-201ENST00000385231 88 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 UBE2V1P10-201ENST00000414685 269 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AL627311.1-201ENST00000431514 115 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 RPL23AP30-201ENST00000432419 501 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AP001025.1-201ENST00000486139 332 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 RPS29P21-201ENST00000496272 170 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AC091951.3-201ENST00000504093 246 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AC020699.1-201ENST00000505161 445 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AP004607.1-201ENST00000524456 203 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 MTND4P33-201ENST00000556706 766 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AC087241.4-201ENST00000612441 480 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AC108479.2-201ENST00000617314 601 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 AL607023.1-201ENST00000620045 248 ntBASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCNB1IP1Q9NPC3 SNORD3E-201ENST00000362899 217 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 RNU6-611P-201ENST00000384276 104 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 SNORD56-201ENST00000413522 71 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 SSXP1-201ENST00000453640 473 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AL049829.1-201ENST00000465411 156 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC092436.1-201ENST00000506450 503 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AL138889.2-201ENST00000603883 242 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC105148.1-201ENST00000604961 409 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AL132822.1-201ENST00000617063 513 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC010608.3-201ENST00000625048 527 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 FARSBP1-201ENST00000435808 1778 ntBASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCNB1IP1Q9NPC3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 AL391994.1-201ENST00000254724 282 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 Y_RNA.18-201ENST00000362461 102 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 SNORD14B-201ENST00000364533 90 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 RNA5SP465-201ENST00000391195 109 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 RPS27AP14-201ENST00000422868 454 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 MTCO2P23-201ENST00000425216 680 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 RPL37P21-201ENST00000435890 276 ntBASIC1.68□□□□□ -2.14
CCNB1IP1Q9NPC3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms