Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 RNU1-54P-201ENST00000517181 120 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.31□□□□□ -1.88
CD3EAPO15446 AC044792.1-201ENST00000593294 196 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 AC008121.1-201ENST00000603244 268 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 AP000787.2-201ENST00000604432 568 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 AC012468.1-201ENST00000604888 430 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 MIR6128-201ENST00000615528 109 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
CD3EAPO15446 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD3EAPO15446 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
CD3EAPO15446 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD3EAPO15446 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD3EAPO15446 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CD3EAPO15446 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 RNU6-593P-201ENST00000364716 112 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 RNU6-293P-201ENST00000411259 106 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 NDUFS5P4-201ENST00000412983 318 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.3□□□□□ -1.88
CD3EAPO15446 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AC092017.2-201ENST00000427600 362 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.3□□□□□ -1.88
CD3EAPO15446 snoU109.2-201ENST00000459316 135 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AC128713.1-201ENST00000471495 306 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AC116337.1-201ENST00000509680 687 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 Y_RNA.687-201ENST00000516558 91 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 RNU6-1016P-201ENST00000516689 94 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD3EAPO15446 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.3□□□□□ -1.88
CD3EAPO15446 MIR3158-1-201ENST00000583596 81 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 AL133255.1-201ENST00000606374 441 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD3EAPO15446 AC064836.2-201ENST00000609491 462 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 MIR6798-201ENST00000612887 67 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 MTND4LP32-201ENST00000636111 270 ntBASIC3.3□□□□□ -1.88
CD3EAPO15446 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD3EAPO15446 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD3EAPO15446 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD3EAPO15446 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD3EAPO15446 SNORD62.1-201ENST00000362541 86 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 RNU1-70P-201ENST00000362618 164 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 MIR490-201ENST00000384865 128 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 RNU6-1106P-201ENST00000390845 107 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 RNY4P36-201ENST00000391116 96 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.29□□□□□ -1.88
CD3EAPO15446 SNORD56-201ENST00000413522 71 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD3EAPO15446 SAR1AP4-201ENST00000429225 591 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.29□□□□□ -1.88
CD3EAPO15446 AL645568.3-201ENST00000433683 316 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AL031274.1-201ENST00000450334 232 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 snoU13.28-201ENST00000459235 104 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 SNORA67.7-201ENST00000516664 135 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 Y_RNA.718-201ENST00000517110 102 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.29□□□□□ -1.88
CD3EAPO15446 APOOP3-201ENST00000536787 586 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AL391261.3-201ENST00000557194 520 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 LINC00933-203ENST00000559812 219 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.29□□□□□ -1.88
CD3EAPO15446 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
CD3EAPO15446 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 MTND4LP5-201ENST00000605152 292 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
CD3EAPO15446 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CD3EAPO15446 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
CD3EAPO15446 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD3EAPO15446 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD3EAPO15446 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.28□□□□□ -1.88
CD3EAPO15446 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD3EAPO15446 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD3EAPO15446 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.28□□□□□ -1.88
CD3EAPO15446 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.28□□□□□ -1.88
CD3EAPO15446 Y_RNA.315-201ENST00000365117 102 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 Z98749.2-208ENST00000381646 500 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RNU6-72P-201ENST00000384285 79 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 SNORD116-29-201ENST00000384516 83 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RNU6-1304P-201ENST00000411374 106 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 AC016831.2-201ENST00000417179 352 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.28□□□□□ -1.88
CD3EAPO15446 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 AL159987.2-201ENST00000432754 307 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.28□□□□□ -1.88
CD3EAPO15446 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
CD3EAPO15446 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.28□□□□□ -1.88
CD3EAPO15446 BTF3P15-201ENST00000455606 336 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RNU7-187P-201ENST00000458985 68 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 SNORA84-201ENST00000459229 133 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RPL23AP45-201ENST00000476406 468 ntBASIC3.28□□□□□ -1.88
CD3EAPO15446 RN7SL293P-201ENST00000481765 281 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms