Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 AC008725.1-201ENST00000605123 2263 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHS1O60500 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHS1O60500 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPHS1O60500 RNU1-76P-201ENST00000362903 159 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 RNU1-18P-201ENST00000363062 164 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 RNA5SP366-201ENST00000365454 123 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 Y_RNA.358-201ENST00000365491 99 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHS1O60500 MIR3074-201ENST00000384885 81 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 MTCYBP2-201ENST00000407745 171 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHS1O60500 VDAC1P3-201ENST00000434069 851 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 UBE2CP3-201ENST00000502715 450 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 MIR2114-201ENST00000516645 80 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 RNU6-1183P-201ENST00000517054 60 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHS1O60500 H3F3AP1-201ENST00000559984 334 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 uc_338.32-201ENST00000615087 172 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 U6.104-201ENST00000637979 90 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHS1O60500 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NPHS1O60500 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHS1O60500 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPHS1O60500 MTND5P6-201ENST00000422338 1798 ntBASIC3.89□□□□□ -1.79
NPHS1O60500 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHS1O60500 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NPHS1O60500 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPHS1O60500 Y_RNA.27-201ENST00000362540 103 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 Y_RNA.183-201ENST00000363882 113 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 RNU6-105P-201ENST00000363909 104 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 Y_RNA.458-201ENST00000384240 102 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 RNU6-658P-201ENST00000384606 106 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 Y_RNA.562-201ENST00000384695 113 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 HLFP1-201ENST00000402375 499 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC245028.1-201ENST00000423259 256 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AL512844.2-201ENST00000433990 593 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 NDUFB4P6-201ENST00000436819 366 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 RNU7-87P-201ENST00000459343 62 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC098869.1-201ENST00000481627 292 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC010469.2-201ENST00000496412 480 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 SNORA43.2-201ENST00000516652 128 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 CASP1P1-201ENST00000526345 212 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHS1O60500 AC104581.2-201ENST00000572227 430 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC060766.3-201ENST00000591442 263 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AL109918.3-201ENST00000603072 338 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
NPHS1O60500 FTX_3.1-201ENST00000610451 147 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC097372.5-201ENST00000623665 376 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
NPHS1O60500 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHS1O60500 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHS1O60500 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHS1O60500 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NPHS1O60500 RNU6-217P-201ENST00000384164 104 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 BTF3L4P2-201ENST00000392798 346 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL21P75-201ENST00000396599 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL21P28-201ENST00000401418 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 U3.37-201ENST00000408528 213 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RNU2-37P-201ENST00000410695 177 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 HSPE1P12-201ENST00000412576 301 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AL590556.1-201ENST00000423231 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHS1O60500 RPL23AP22-201ENST00000437556 453 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHS1O60500 NUTF2P7-201ENST00000453086 375 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL21P11-201ENST00000461458 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL21P39-201ENST00000463605 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL39P38-201ENST00000467018 153 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RN7SL303P-201ENST00000469773 251 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 TRBVB-201ENST00000477100 408 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC087190.1-201ENST00000484462 480 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC107032.1-201ENST00000485945 480 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC132942.1-201ENST00000486753 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC093591.1-201ENST00000491435 481 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL30P5-201ENST00000494923 336 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RPL21P16-201ENST00000495531 483 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC146944.2-203ENST00000502493 354 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC139495.1-202ENST00000513164 354 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RNU6-1023P-201ENST00000516137 106 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 RNU1-103P-201ENST00000516502 125 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.87□□□□□ -1.79
NPHS1O60500 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 AC010186.2-204ENST00000537668 439 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 TOMM20P2-201ENST00000540082 421 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC073410.2-201ENST00000603240 332 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC243829.7-201ENST00000633081 225 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms