Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3L3A6NE82 MIR5690-201ENST00000583739 73 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 SRGNP1-201ENST00000603392 451 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 MIR3976-201ENST00000606807 139 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 AL133215.3-201ENST00000609801 448 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 MIR7851-201ENST00000610611 160 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 AL160413.1-201ENST00000622780 310 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 AC091953.5-201ENST00000622919 233 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 AC007823.1-201ENST00000569932 1566 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD3L3A6NE82 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
MBD3L3A6NE82 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 RNU1-105P-201ENST00000363470 161 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 RNU6-1059P-201ENST00000363752 98 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 RNU6-1188P-201ENST00000363795 107 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 SNORD74.4-201ENST00000364129 80 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 MTHFD2P2-201ENST00000407725 247 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 Y_RNA.594-201ENST00000410373 140 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 Z99755.1-201ENST00000414048 380 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 ATG3P1-201ENST00000419507 911 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 PTGES3P4-201ENST00000426243 356 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AP000907.1-201ENST00000428428 510 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 DAP3P1-201ENST00000441522 278 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 RPL30P15-201ENST00000457129 321 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 Y_RNA.653-201ENST00000459091 95 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 MTCYBP40-201ENST00000509390 1135 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 RN7SKP209-201ENST00000516888 304 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 ACA59.2-201ENST00000517061 156 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC008011.1-201ENST00000545989 227 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC025281.1-201ENST00000567026 265 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC007179.3-201ENST00000604976 235 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AP000654.2-201ENST00000605633 586 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AL133255.1-201ENST00000606374 441 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC009229.3-201ENST00000608056 282 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AC090617.7-201ENST00000623952 126 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 AL669831.3-213ENST00000636676 183 ntBASIC3.23□□□□□ -1.89
MBD3L3A6NE82 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
MBD3L3A6NE82 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 SNORD56.1-201ENST00000362913 68 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RNU6-19P-201ENST00000384718 107 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 MIR521-1-201ENST00000384902 87 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 SNORA75.4-201ENST00000391278 119 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RNU6-1050P-201ENST00000410388 107 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RNA5SP104-201ENST00000410989 118 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC236972.1-201ENST00000433225 199 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RPS3AP12-201ENST00000443616 753 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AL136097.1-201ENST00000456945 913 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 MED28P2-201ENST00000475771 317 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RPL7P42-201ENST00000481005 679 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 PTP4A1P4-201ENST00000512479 322 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC026782.1-201ENST00000512952 449 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RNU5F-8P-201ENST00000515941 111 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 ACA59.1-201ENST00000515966 143 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 Y_RNA.670-201ENST00000516255 105 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC109446.1-201ENST00000566172 220 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC009163.5-201ENST00000575421 637 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC133104.2-201ENST00000615272 193 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L3A6NE82 AC010889.1-201ENST00000566193 2666 ntBASIC3.22□□□□□ -1.89
MBD3L3A6NE82 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
MBD3L3A6NE82 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 SNORA9-201ENST00000384215 133 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 RNA5SP354-201ENST00000391247 136 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 RNU6-1245P-201ENST00000411130 106 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 MTND3P9-201ENST00000429526 346 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 AL133396.1-201ENST00000432048 687 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD3L3A6NE82 CYCSP35-201ENST00000451978 304 ntBASIC3.21□□□□□ -1.9
MBD3L3A6NE82 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms