Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 RNU6-1093P-201ENST00000391194 107 ntBASIC4.09□□□□□ -1.75
CTSKP43235 SNORD66.1-201ENST00000391230 76 ntBASIC4.09□□□□□ -1.75
CTSKP43235 RNU2-64P-201ENST00000411315 191 ntBASIC4.09□□□□□ -1.75
CTSKP43235 Z82210.1-201ENST00000440037 231 ntBASIC4.09□□□□□ -1.75
CTSKP43235 RPEP5-201ENST00000441137 268 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
CTSKP43235 AC124916.1-201ENST00000444020 547 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC009237.8-201ENST00000445492 379 ntBASIC4.09□□□□□ -1.75
CTSKP43235 LINC01399-202ENST00000458450 244 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC139453.3-201ENST00000493276 369 ntBASIC4.09□□□□□ -1.75
CTSKP43235 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.09□□□□□ -1.75
CTSKP43235 AC025465.3-201ENST00000510570 311 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC074250.1-201ENST00000511117 192 ntBASIC4.09□□□□□ -1.75
CTSKP43235 Y_RNA.713-201ENST00000517013 96 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC010186.2-204ENST00000537668 439 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC104581.2-201ENST00000572227 430 ntBASIC4.09□□□□□ -1.75
CTSKP43235 MIR5685-201ENST00000579080 79 ntBASIC4.09□□□□□ -1.75
CTSKP43235 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.09□□□□□ -1.75
CTSKP43235 AC131238.1-201ENST00000617135 328 ntBASIC4.09□□□□□ -1.75
CTSKP43235 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CTSKP43235 MIR6500-201ENST00000622700 86 ntBASIC4.09□□□□□ -1.75
CTSKP43235 BMS1P21-201ENST00000634565 365 ntBASIC4.09□□□□□ -1.75
CTSKP43235 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CTSKP43235 U4.7-201ENST00000638126 106 ntBASIC4.09□□□□□ -1.75
CTSKP43235 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTSKP43235 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.09□□□□□ -1.75
CTSKP43235 AL161912.2-201ENST00000565707 3007 ntBASIC4.09□□□□□ -1.75
CTSKP43235 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.09□□□□□ -1.76
CTSKP43235 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTSKP43235 AC007785.2-201ENST00000598627 1916 ntBASIC4.09□□□□□ -1.76
CTSKP43235 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
CTSKP43235 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTSKP43235 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CTSKP43235 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 NOL8P1-201ENST00000508336 3529 ntBASIC4.08□□□□□ -1.76
CTSKP43235 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 MIR190B-201ENST00000401119 79 ntBASIC4.08□□□□□ -1.76
CTSKP43235 RPS29P13-201ENST00000402041 169 ntBASIC4.08□□□□□ -1.76
CTSKP43235 MIR1179-201ENST00000408703 91 ntBASIC4.08□□□□□ -1.76
CTSKP43235 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.08□□□□□ -1.76
CTSKP43235 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 MTND5P6-201ENST00000422338 1798 ntBASIC4.08□□□□□ -1.76
CTSKP43235 AL445584.1-201ENST00000431451 330 ntBASIC4.08□□□□□ -1.76
CTSKP43235 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 CEACAMP4-201ENST00000457676 421 ntBASIC4.08□□□□□ -1.76
CTSKP43235 RPS29P27-201ENST00000463711 170 ntBASIC4.08□□□□□ -1.76
CTSKP43235 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.08□□□□□ -1.76
CTSKP43235 MIR2355-201ENST00000517199 87 ntBASIC4.08□□□□□ -1.76
CTSKP43235 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.08□□□□□ -1.76
CTSKP43235 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.08□□□□□ -1.76
CTSKP43235 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.08□□□□□ -1.76
CTSKP43235 SDR42E1P4-201ENST00000620894 481 ntBASIC4.08□□□□□ -1.76
CTSKP43235 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTSKP43235 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CTSKP43235 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CTSKP43235 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
CTSKP43235 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CTSKP43235 AP000560.1-201ENST00000624150 1937 ntBASIC4.07□□□□□ -1.76
CTSKP43235 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTSKP43235 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTSKP43235 SNORA71.3-201ENST00000362582 128 ntBASIC4.07□□□□□ -1.76
CTSKP43235 RNU6-428P-201ENST00000362942 107 ntBASIC4.07□□□□□ -1.76
CTSKP43235 MIR548I3-201ENST00000408378 149 ntBASIC4.07□□□□□ -1.76
CTSKP43235 MIR548I1-201ENST00000408810 149 ntBASIC4.07□□□□□ -1.76
CTSKP43235 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.07□□□□□ -1.76
CTSKP43235 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.07□□□□□ -1.76
CTSKP43235 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.07□□□□□ -1.76
CTSKP43235 HMGN2P21-201ENST00000447764 270 ntBASIC4.07□□□□□ -1.76
CTSKP43235 AL133547.1-201ENST00000448546 220 ntBASIC4.07□□□□□ -1.76
CTSKP43235 MTND4LP30-201ENST00000454092 297 ntBASIC4.07□□□□□ -1.76
CTSKP43235 RPS26P15-201ENST00000488067 348 ntBASIC4.07□□□□□ -1.76
CTSKP43235 RNU6-570P-201ENST00000517051 105 ntBASIC4.07□□□□□ -1.76
CTSKP43235 RNU6-1073P-201ENST00000517182 106 ntBASIC4.07□□□□□ -1.76
CTSKP43235 AC007375.1-201ENST00000554513 578 ntBASIC4.07□□□□□ -1.76
CTSKP43235 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.07□□□□□ -1.76
CTSKP43235 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.07□□□□□ -1.76
CTSKP43235 AC024220.1-201ENST00000603675 484 ntBASIC4.07□□□□□ -1.76
CTSKP43235 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.07□□□□□ -1.76
CTSKP43235 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.07□□□□□ -1.76
CTSKP43235 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.07□□□□□ -1.76
CTSKP43235 CR392039.5-201ENST00000623201 510 ntBASIC4.07□□□□□ -1.76
CTSKP43235 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.07□□□□□ -1.76
CTSKP43235 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTSKP43235 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.06□□□□□ -1.76
CTSKP43235 AC118273.1-201ENST00000525324 3006 ntBASIC4.06□□□□□ -1.76
CTSKP43235 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
CTSKP43235 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.06□□□□□ -1.76
CTSKP43235 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.06□□□□□ -1.76
CTSKP43235 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
CTSKP43235 SNORA70.4-201ENST00000365509 134 ntBASIC4.06□□□□□ -1.76
CTSKP43235 MIR200C-201ENST00000384980 68 ntBASIC4.06□□□□□ -1.76
CTSKP43235 SNORA12.2-201ENST00000391040 156 ntBASIC4.06□□□□□ -1.76
CTSKP43235 MIR548H3-201ENST00000408771 118 ntBASIC4.06□□□□□ -1.76
CTSKP43235 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms