Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SNORA31.22-201ENST00000517204 135 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.3□□□□□ -2.36
GAFA1Q96PS6 HSPA8P13-201ENST00000523715 472 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AL022067.1-201ENST00000602426 454 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AL713866.2-201ENST00000603579 219 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC009229.3-201ENST00000608056 282 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC135803.1-201ENST00000608748 565 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC040896.1-201ENST00000613819 479 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC073569.3-201ENST00000619055 682 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 AC091965.5-201ENST00000624785 342 ntBASIC0.3□□□□□ -2.36
GAFA1Q96PS6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
GAFA1Q96PS6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
GAFA1Q96PS6 RNU1-23P-201ENST00000363361 144 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 Y_RNA.269-201ENST00000364685 89 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 MIR608-201ENST00000384820 100 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 MIR888-201ENST00000401186 77 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.29□□□□□ -2.36
GAFA1Q96PS6 KATNBL1P6-201ENST00000453433 915 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC244505.3-201ENST00000454598 187 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 snoU13.18-201ENST00000459483 104 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC087477.1-201ENST00000465747 340 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 RAP1BP2-201ENST00000478270 544 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
GAFA1Q96PS6 RNU6-488P-201ENST00000515918 99 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 CYCSP27-201ENST00000527643 293 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 VN1R82P-201ENST00000601481 356 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC112191.3-201ENST00000604371 277 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 BX284668.6-201ENST00000606899 438 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC068787.1-201ENST00000623908 691 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC099654.5-201ENST00000636479 350 ntBASIC0.29□□□□□ -2.36
GAFA1Q96PS6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.29□□□□□ -2.36
GAFA1Q96PS6 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 RNU6-884P-201ENST00000363889 107 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 Y_RNA.796-201ENST00000364268 102 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 Y_RNA.799-201ENST00000364992 102 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 SNORA25-201ENST00000384384 134 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.28□□□□□ -2.36
GAFA1Q96PS6 BET1P1-201ENST00000482276 359 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 Y_RNA.673-201ENST00000516306 88 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 SCARNA15.2-201ENST00000516409 127 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 RNU6-1256P-201ENST00000516539 103 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 SNORA31.17-201ENST00000516953 127 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 NRON-201ENST00000517270 370 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AC124293.1-201ENST00000530034 493 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AC006199.1-201ENST00000548728 219 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AC124947.2-202ENST00000552735 133 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AL022345.2-201ENST00000606307 135 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.28□□□□□ -2.36
GAFA1Q96PS6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.28□□□□□ -2.36
GAFA1Q96PS6 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC138393.1-203ENST00000327086 343 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 SNORA48.1-201ENST00000390879 135 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AL596276.1-201ENST00000434465 418 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 NANOGP2-201ENST00000435391 727 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 MTND4P6-201ENST00000438297 472 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 UBE2V1P5-201ENST00000440070 405 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC098831.1-201ENST00000440661 216 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AL035666.1-201ENST00000446195 348 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC113420.1-201ENST00000507903 571 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC009268.1-201ENST00000561352 1203 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC006270.3-201ENST00000605967 1036 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 AC021851.1-201ENST00000608537 1082 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 FTX_3.1-201ENST00000610451 147 ntBASIC0.27□□□□□ -2.37
GAFA1Q96PS6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
GAFA1Q96PS6 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 RPL23AP32-201ENST00000395315 459 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AL031577.2-201ENST00000404133 280 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 FTH1P15-201ENST00000406984 280 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AC010385.1-201ENST00000412374 256 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 THAP5P1-201ENST00000439089 262 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 HMGN2P9-201ENST00000476875 229 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AC108078.1-201ENST00000508073 725 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 C1DP5-201ENST00000525775 383 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.26□□□□□ -2.37
GAFA1Q96PS6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.26□□□□□ -2.37
GAFA1Q96PS6 BNIP3P16-201ENST00000589779 534 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AC092953.2-201ENST00000608000 699 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.26□□□□□ -2.37
GAFA1Q96PS6 AC018926.3-201ENST00000618841 406 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 MIR8063-201ENST00000621930 81 ntBASIC0.26□□□□□ -2.37
GAFA1Q96PS6 LINC00216-201ENST00000623548 1126 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms