Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.34□□□□□ -2.19
LTAP01374 MTND2P29-201ENST00000438595 412 ntBASIC1.34□□□□□ -2.19
LTAP01374 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.34□□□□□ -2.19
LTAP01374 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.34□□□□□ -2.19
LTAP01374 AC006512.1-201ENST00000468816 291 ntBASIC1.34□□□□□ -2.19
LTAP01374 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.34□□□□□ -2.19
LTAP01374 AC109927.2-201ENST00000506416 303 ntBASIC1.34□□□□□ -2.19
LTAP01374 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LTAP01374 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.34□□□□□ -2.19
LTAP01374 DUXAP5-201ENST00000529668 529 ntBASIC1.34□□□□□ -2.19
LTAP01374 AC023050.2-201ENST00000544968 387 ntBASIC1.34□□□□□ -2.19
LTAP01374 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.34□□□□□ -2.19
LTAP01374 IMMP1LP2-201ENST00000552954 492 ntBASIC1.34□□□□□ -2.19
LTAP01374 MIR1273D-201ENST00000577266 86 ntBASIC1.34□□□□□ -2.19
LTAP01374 MIR1273C-201ENST00000578669 77 ntBASIC1.34□□□□□ -2.19
LTAP01374 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.34□□□□□ -2.19
LTAP01374 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.34□□□□□ -2.19
LTAP01374 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.34□□□□□ -2.19
LTAP01374 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
LTAP01374 RBBP8P1-201ENST00000449447 1844 ntBASIC1.33□□□□□ -2.2
LTAP01374 RNY4P24-201ENST00000362735 96 ntBASIC1.33□□□□□ -2.2
LTAP01374 RNU6-1010P-201ENST00000362757 107 ntBASIC1.33□□□□□ -2.2
LTAP01374 RNA5SP363-201ENST00000365072 115 ntBASIC1.33□□□□□ -2.2
LTAP01374 RNA5SP88-201ENST00000365560 109 ntBASIC1.33□□□□□ -2.2
LTAP01374 RNU6-395P-201ENST00000365662 106 ntBASIC1.33□□□□□ -2.2
LTAP01374 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LTAP01374 MIR186-201ENST00000384988 86 ntBASIC1.33□□□□□ -2.2
LTAP01374 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.33□□□□□ -2.2
LTAP01374 RPS20P15-201ENST00000412792 311 ntBASIC1.33□□□□□ -2.2
LTAP01374 AL135786.1-201ENST00000415892 214 ntBASIC1.33□□□□□ -2.2
LTAP01374 AC016831.2-201ENST00000417179 352 ntBASIC1.33□□□□□ -2.2
LTAP01374 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 HMGB3P12-201ENST00000438745 556 ntBASIC1.33□□□□□ -2.2
LTAP01374 USP9YP15-201ENST00000442391 422 ntBASIC1.33□□□□□ -2.2
LTAP01374 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.33□□□□□ -2.2
LTAP01374 PTENP1-201ENST00000447117 1215 ntBASIC1.33□□□□□ -2.2
LTAP01374 AL031313.1-201ENST00000448435 256 ntBASIC1.33□□□□□ -2.2
LTAP01374 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.33□□□□□ -2.2
LTAP01374 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.33□□□□□ -2.2
LTAP01374 BZW1P2-201ENST00000473537 826 ntBASIC1.33□□□□□ -2.2
LTAP01374 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.33□□□□□ -2.2
LTAP01374 RNU2-53P-201ENST00000516257 147 ntBASIC1.33□□□□□ -2.2
LTAP01374 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.33□□□□□ -2.2
LTAP01374 CYCSP27-201ENST00000527643 293 ntBASIC1.33□□□□□ -2.2
LTAP01374 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.33□□□□□ -2.2
LTAP01374 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LTAP01374 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.33□□□□□ -2.2
LTAP01374 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 BNIP3P30-201ENST00000601184 574 ntBASIC1.33□□□□□ -2.2
LTAP01374 AC098614.4-201ENST00000607601 462 ntBASIC1.33□□□□□ -2.2
LTAP01374 AC106052.1-201ENST00000608029 497 ntBASIC1.33□□□□□ -2.2
LTAP01374 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LTAP01374 AC108479.2-201ENST00000617314 601 ntBASIC1.33□□□□□ -2.2
LTAP01374 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.33□□□□□ -2.2
LTAP01374 MIR3529-201ENST00000637713 78 ntBASIC1.33□□□□□ -2.2
LTAP01374 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LTAP01374 RNU6-190P-201ENST00000384154 102 ntBASIC1.32□□□□□ -2.2
LTAP01374 RNU6-757P-201ENST00000410334 100 ntBASIC1.32□□□□□ -2.2
LTAP01374 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 PGBD4P6-201ENST00000421501 610 ntBASIC1.32□□□□□ -2.2
LTAP01374 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.32□□□□□ -2.2
LTAP01374 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 IFNA20P-201ENST00000436840 528 ntBASIC1.32□□□□□ -2.2
LTAP01374 AL831737.1-201ENST00000441288 271 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC096638.1-201ENST00000444678 216 ntBASIC1.32□□□□□ -2.2
LTAP01374 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.32□□□□□ -2.2
LTAP01374 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.32□□□□□ -2.2
LTAP01374 RPL9P6-201ENST00000492764 598 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.32□□□□□ -2.2
LTAP01374 RNU6-1092P-201ENST00000516955 87 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 MTATP6P15-201ENST00000527233 835 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC087276.1-201ENST00000529659 480 ntBASIC1.32□□□□□ -2.2
LTAP01374 AP000763.2-201ENST00000540641 163 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.32□□□□□ -2.2
LTAP01374 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 AC025678.1-201ENST00000567861 338 ntBASIC1.32□□□□□ -2.2
LTAP01374 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LTAP01374 BNIP3P25-201ENST00000596023 559 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC174048.1-201ENST00000603389 144 ntBASIC1.32□□□□□ -2.2
LTAP01374 AP000860.1-201ENST00000605250 559 ntBASIC1.32□□□□□ -2.2
LTAP01374 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.32□□□□□ -2.2
LTAP01374 uc_338.15-201ENST00000615470 191 ntBASIC1.32□□□□□ -2.2
LTAP01374 uc_338.12-201ENST00000616344 181 ntBASIC1.32□□□□□ -2.2
LTAP01374 AP000484.1-201ENST00000620067 1252 ntBASIC1.32□□□□□ -2.2
LTAP01374 AC090517.3-201ENST00000625170 141 ntBASIC1.32□□□□□ -2.2
LTAP01374 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LTAP01374 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LTAP01374 AC092881.1-201ENST00000638218 2733 ntBASIC1.32□□□□□ -2.2
LTAP01374 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.32□□□□□ -2.2
LTAP01374 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
LTAP01374 Y_RNA.46-201ENST00000362695 102 ntBASIC1.31□□□□□ -2.2
LTAP01374 RNU6-511P-201ENST00000363496 107 ntBASIC1.31□□□□□ -2.2
LTAP01374 RNU5E-6P-201ENST00000365574 115 ntBASIC1.31□□□□□ -2.2
LTAP01374 RNU6-636P-201ENST00000384598 107 ntBASIC1.31□□□□□ -2.2
LTAP01374 MIR29C-201ENST00000385231 88 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms