Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC021755.4-201ENST00000616620 456 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 PVT1_3.1-201ENST00000620853 95 ntBASIC1.85□□□□□ -2.11
SCN4AP35499 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN4AP35499 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN4AP35499 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCN4AP35499 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SCN4AP35499 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-741P-201ENST00000383889 107 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-701P-201ENST00000384059 107 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-636P-201ENST00000384598 107 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNA5SP252-201ENST00000391131 119 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 FCF1P10-201ENST00000407590 479 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 MIR1290-201ENST00000408735 78 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-920P-201ENST00000410926 92 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-193P-201ENST00000410977 107 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 HIGD1AP15-201ENST00000416198 280 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.84□□□□□ -2.11
SCN4AP35499 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN4AP35499 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN4AP35499 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN4AP35499 RN7SKP265-201ENST00000516448 223 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.84□□□□□ -2.11
SCN4AP35499 AC107934.1-201ENST00000522215 217 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.84□□□□□ -2.11
SCN4AP35499 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
SCN4AP35499 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN4AP35499 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN4AP35499 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.84□□□□□ -2.11
SCN4AP35499 AC011260.1-201ENST00000578420 472 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.84□□□□□ -2.11
SCN4AP35499 AL390240.1-201ENST00000612950 384 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 AC090132.2-201ENST00000615881 347 ntBASIC1.84□□□□□ -2.11
SCN4AP35499 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCN4AP35499 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SCN4AP35499 Y_RNA.560-201ENST00000384689 102 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 MIR19A-201ENST00000384878 82 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 RNU6-757P-201ENST00000410334 100 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN4AP35499 AC099548.1-201ENST00000421443 426 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC011233.1-201ENST00000422812 283 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AL591704.1-201ENST00000432574 275 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN4AP35499 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN4AP35499 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN4AP35499 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AL049714.1-201ENST00000466686 347 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AL160314.1-201ENST00000490836 438 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 MTCYBP43-201ENST00000513621 740 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 SCARNA15.2-201ENST00000516409 127 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 SNORD19.2-201ENST00000516978 73 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 SNORA31.24-201ENST00000517232 57 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC022878.1-201ENST00000530684 149 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SCN4AP35499 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN4AP35499 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN4AP35499 MTATP6P24-201ENST00000576835 677 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC174048.1-201ENST00000603389 144 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC027449.1-201ENST00000608890 407 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC004908.2-201ENST00000609090 574 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC005296.1-201ENST00000616145 209 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN4AP35499 AC068880.5-201ENST00000624331 290 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AP000676.4-201ENST00000624659 623 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN4AP35499 AC135776.4-201ENST00000624300 1904 ntBASIC1.84□□□□□ -2.12
SCN4AP35499 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SCN4AP35499 AC121333.1-201ENST00000567488 2709 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SCN4AP35499 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SCN4AP35499 AL136164.4-201ENST00000625013 2135 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
SCN4AP35499 RNU1-93P-201ENST00000364704 169 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 SNORA72.3-201ENST00000365074 132 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SCN4AP35499 AL008987.1-201ENST00000415528 237 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 VPS26BP1-201ENST00000417155 755 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC019178.2-201ENST00000423595 505 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN4AP35499 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN4AP35499 AL008629.1-201ENST00000438615 184 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 TPT1P14-201ENST00000448018 505 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 SNRPGP6-201ENST00000451124 220 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN4AP35499 AC026801.1-201ENST00000497178 464 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 RNU6-201P-201ENST00000517100 61 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC084851.1-201ENST00000529105 249 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SCN4AP35499 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN4AP35499 UBE2L4-201ENST00000587688 464 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC112187.2-201ENST00000604345 283 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC106791.2-201ENST00000604680 391 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC018714.1-201ENST00000605028 208 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC090186.1-201ENST00000605991 572 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AC013476.2-201ENST00000614456 459 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 AL158801.5-201ENST00000623123 465 ntBASIC1.83□□□□□ -2.12
SCN4AP35499 U2.21-201ENST00000637295 81 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms