Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-1026P-201ENST00000384465 108 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 Y_RNA.526-201ENST00000384572 110 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 RPL23AP48-201ENST00000406913 488 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHS1O60500 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHS1O60500 ARL5AP4-201ENST00000430731 512 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AL358472.1-201ENST00000431295 329 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.98□□□□□ -1.77
NPHS1O60500 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHS1O60500 RN7SKP92-201ENST00000517266 244 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 HSPE1P20-201ENST00000538133 289 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHS1O60500 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHS1O60500 AC005476.1-201ENST00000554427 397 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AC020914.4-201ENST00000597690 277 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AC005046.1-201ENST00000608515 625 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 RN7SL722P-201ENST00000617780 284 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 RN7SL565P-201ENST00000618246 284 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 AC078938.1-201ENST00000620993 318 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHS1O60500 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHS1O60500 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NPHS1O60500 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 AL359693.1-201ENST00000614959 2407 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHS1O60500 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 SNORD35B-201ENST00000363660 87 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RNU6-770P-201ENST00000363929 105 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RNU4-50P-201ENST00000364361 141 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 MIR628-201ENST00000385229 95 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 MIR325-201ENST00000385260 98 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RPS16P5-201ENST00000406501 404 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 MIR1302-6-201ENST00000408466 90 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 MIR1251-201ENST00000408552 70 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 Y_RNA.592-201ENST00000410274 109 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AL356968.1-201ENST00000416622 474 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC098614.2-201ENST00000426040 255 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RPL21P66-201ENST00000426566 466 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RPS29P17-201ENST00000430795 166 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 FCF1P4-201ENST00000448326 183 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC079354.2-201ENST00000453523 154 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHS1O60500 SNORD127-201ENST00000458892 86 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RNU6-1132P-201ENST00000459214 107 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RPS29P27-201ENST00000463711 170 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHS1O60500 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHS1O60500 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHS1O60500 RNU6-377P-201ENST00000515965 102 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 RNU6-897P-201ENST00000517135 105 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC109329.1-201ENST00000518744 317 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 OR5D17P-201ENST00000531492 978 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHS1O60500 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHS1O60500 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHS1O60500 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 AC023575.1-201ENST00000580510 358 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 MIR4443-201ENST00000585052 53 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NPHS1O60500 RPS29P30-201ENST00000600975 111 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 AC006557.5-201ENST00000603126 811 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHS1O60500 AC099506.2-201ENST00000623074 221 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHS1O60500 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHS1O60500 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHS1O60500 AC010615.1-201ENST00000594254 1764 ntBASIC3.97□□□□□ -1.77
NPHS1O60500 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NPHS1O60500 AC010733.2-201ENST00000589496 5702 ntBASIC3.96□□□□□ -1.77
NPHS1O60500 Y_RNA.19-201ENST00000362462 99 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHS1O60500 MTCO3P19-201ENST00000415864 321 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.96□□□□□ -1.78
NPHS1O60500 MTCO3P29-201ENST00000432119 779 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 SNRPEP9-201ENST00000436794 238 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 Z82210.1-201ENST00000440037 231 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 RPL30P10-201ENST00000488148 337 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHS1O60500 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 AC099522.1-202ENST00000514718 367 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 SNORA40.15-201ENST00000516884 107 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 MIR5684-201ENST00000585074 65 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 AL390123.1-201ENST00000603216 237 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 U4.7-201ENST00000638126 106 ntBASIC3.96□□□□□ -1.78
NPHS1O60500 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms