Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNY3P3-201ENST00000363816 102 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU5A-8P-201ENST00000364102 114 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU6-7-201ENST00000364784 107 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU6-8-201ENST00000365467 107 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU6-108P-201ENST00000365558 107 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 Y_RNA.381-201ENST00000365666 102 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 SNORA20.2-201ENST00000383922 131 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU6-1158P-201ENST00000391167 107 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RPS20P5-201ENST00000434808 360 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RPL21P2-201ENST00000440049 481 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC005094.1-201ENST00000440420 368 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MTND4LP16-201ENST00000440828 295 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC020550.1-201ENST00000447385 163 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 GSTA11P-201ENST00000452866 669 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC083798.1-201ENST00000472671 131 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC233702.1-201ENST00000482905 502 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RPL39P36-201ENST00000490784 156 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MTCO2P30-201ENST00000503662 364 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RNU6-1281P-201ENST00000516223 105 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AF235103.2-201ENST00000525753 346 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 RMST_3.1-201ENST00000611651 109 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 SNHG22-203ENST00000617833 660 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MIR3662-201ENST00000637030 95 ntBASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
DDX43Q9NXZ2 AL354685.2-201ENST00000448218 1447 ntBASIC3.09□□□□□ -1.92
DDX43Q9NXZ2 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.92
DDX43Q9NXZ2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 CBX3P1-201ENST00000325243 554 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 RNU1-105P-201ENST00000363470 161 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 RNU6-1322P-201ENST00000364309 107 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 Y_RNA.279-201ENST00000364763 95 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 Y_RNA.481-201ENST00000384373 102 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL356776.1-201ENST00000406574 447 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 RPL21P111-201ENST00000418453 477 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL365496.1-201ENST00000426885 215 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 GTF2IP20-201ENST00000431663 360 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 MTND3P23-201ENST00000431980 347 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 TIMM9P1-201ENST00000436122 256 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 RPL7P54-201ENST00000438336 674 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC108059.3-201ENST00000456388 214 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC022364.2-201ENST00000457963 554 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL160314.1-201ENST00000490836 438 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 HMGN1P12-201ENST00000499125 195 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC008628.2-201ENST00000502605 298 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 RNU6-927P-201ENST00000516199 100 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 SNORA40.12-201ENST00000516329 111 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 SCARNA24.1-201ENST00000516465 137 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL359212.1-201ENST00000556608 614 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL356055.1-201ENST00000602528 446 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 AL162413.1-201ENST00000603198 110 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 uc_338.12-201ENST00000616344 181 ntBASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX43Q9NXZ2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 Y_RNA.813-201ENST00000364639 102 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RNU6-877P-201ENST00000383868 107 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RNU6-74P-201ENST00000384235 107 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RNU6-140P-201ENST00000384566 108 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RNU6-278P-201ENST00000390945 109 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AL359634.1-202ENST00000404721 284 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 ZNF90P2-204ENST00000419323 1075 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 SNRPEP10-201ENST00000420249 274 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RPL23AP30-201ENST00000432419 501 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AL606489.2-201ENST00000433886 234 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 UBE2V1P7-201ENST00000446395 340 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AC079382.1-201ENST00000493346 557 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 AC046134.1-201ENST00000514454 666 ntBASIC3.07□□□□□ -1.92
DDX43Q9NXZ2 RNU6-64P-201ENST00000517119 105 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms