Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL355497.1-201ENST00000406262 551 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AL356320.2-201ENST00000417263 507 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 Z75741.2-201ENST00000417272 1167 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AC092573.2-201ENST00000434546 243 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 SNRPGP13-201ENST00000442212 177 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 snoU13.8-201ENST00000458890 104 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AC096571.1-202ENST00000506634 735 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 CDC42P4-201ENST00000510507 563 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AC006499.2-201ENST00000513470 337 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 DEFB131D-201ENST00000526803 184 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AL022067.1-201ENST00000602426 454 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 RPL21P136-201ENST00000605378 396 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AC103810.8-201ENST00000607347 118 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AL138955.1-201ENST00000622881 1040 ntBASIC1.73□□□□□ -2.13
SHANK3Q9BYB0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 RNU6-217P-201ENST00000384164 104 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 RNU6-1035P-201ENST00000384477 107 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 VN1R108P-201ENST00000431580 830 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 RNU6-583P-201ENST00000516012 92 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 RNU6-1225P-201ENST00000516336 65 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AL512347.1-201ENST00000566420 503 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AL353997.4-201ENST00000586196 166 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AL606834.3-201ENST00000602615 496 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AL136363.1-201ENST00000605349 337 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC112220.2-201ENST00000605513 533 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC004852.3-201ENST00000614131 326 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 AC123767.1-202ENST00000620407 817 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 CENPCP1-201ENST00000533085 2578 ntBASIC1.72□□□□□ -2.13
SHANK3Q9BYB0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 Y_RNA.311-201ENST00000365068 96 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 RPS12P24-201ENST00000412619 387 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 IFNA20P-201ENST00000436840 528 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AL139109.1-201ENST00000455491 297 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 TMEM251P1-201ENST00000503717 318 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 SCARNA15.2-201ENST00000516409 127 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AC005498.1-201ENST00000592125 465 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AL390208.1-201ENST00000605885 644 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 AC009237.15-201ENST00000610252 501 ntBASIC1.71□□□□□ -2.13
SHANK3Q9BYB0 SNORA40.6-201ENST00000391153 128 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 NDUFB4P7-201ENST00000423198 363 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 UBE2V1P13-201ENST00000436983 439 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC092902.1-201ENST00000486999 259 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 SUMO2P5-201ENST00000506790 245 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC113420.1-201ENST00000507903 571 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC113347.3-201ENST00000509113 148 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC093281.2-201ENST00000510153 597 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 RN7SKP265-201ENST00000516448 223 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AL132657.2-201ENST00000564417 358 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 BBIP1P1-201ENST00000602999 279 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 AC106858.1-201ENST00000637497 429 ntBASIC1.71□□□□□ -2.14
SHANK3Q9BYB0 RNU6-461P-201ENST00000364195 107 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 Y_RNA.578-201ENST00000390903 88 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AL356421.1-201ENST00000403255 413 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AL445669.1-201ENST00000426743 755 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC008850.1-201ENST00000427546 362 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AL590383.1-201ENST00000428602 75 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC087588.1-201ENST00000462203 316 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 MTND4LP3-201ENST00000468320 276 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 RNU6-1256P-201ENST00000516539 103 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC013476.2-201ENST00000614456 459 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 AC090132.2-201ENST00000615881 347 ntBASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SHANK3Q9BYB0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR193B-201ENST00000384907 83 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms