Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Gm24841-201ENSMUST00000158676 357 ntBASIC19.49■□□□□ 0.71
Mre11Q61216 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.49■□□□□ 0.71
Mre11Q61216 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.49■□□□□ 0.71
Mre11Q61216 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mre11Q61216 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.48■□□□□ 0.71
Mre11Q61216 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mre11Q61216 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.47■□□□□ 0.71
Mre11Q61216 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.47■□□□□ 0.71
Mre11Q61216 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.47■□□□□ 0.71
Mre11Q61216 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Gm27405-201ENSMUST00000184201 112 ntBASIC19.47■□□□□ 0.71
Mre11Q61216 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mre11Q61216 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Mre11Q61216 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Mre11Q61216 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mre11Q61216 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.47■□□□□ 0.71
Mre11Q61216 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Mre11Q61216 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Mre11Q61216 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.46■□□□□ 0.71
Mre11Q61216 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.46■□□□□ 0.71
Mre11Q61216 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mre11Q61216 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.46■□□□□ 0.71
Mre11Q61216 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Mre11Q61216 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Mre11Q61216 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.45■□□□□ 0.7
Mre11Q61216 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.45■□□□□ 0.7
Mre11Q61216 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.45■□□□□ 0.7
Mre11Q61216 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Mre11Q61216 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.45■□□□□ 0.7
Mre11Q61216 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Mre11Q61216 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mre11Q61216 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Mre11Q61216 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.44■□□□□ 0.7
Mre11Q61216 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.44■□□□□ 0.7
Mre11Q61216 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.44■□□□□ 0.7
Mre11Q61216 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mre11Q61216 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mre11Q61216 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms