Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Odf3b-204ENSMUST00000227834 930 ntBASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43aQ3TL54 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43aQ3TL54 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Gm13186-201ENSMUST00000118031 316 ntBASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Mir7071-201ENSMUST00000184847 69 ntBASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim43aQ3TL54 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Gm21814-202ENSMUST00000203277 873 ntBASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Timm23-208ENSMUST00000226683 750 ntBASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43aQ3TL54 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms