Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Gm18959-201ENSMUST00000208954 655 ntBASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1aP25118 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Gm11336-201ENSMUST00000118168 334 ntBASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1aP25118 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Mir1668-201ENSMUST00000184114 107 ntBASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm7889-201ENSMUST00000185591 958 ntBASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm44450-201ENSMUST00000199528 114 ntBASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm18421-201ENSMUST00000204122 625 ntBASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm45058-201ENSMUST00000205810 766 ntBASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1aP25118 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1aP25118 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms