Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AP004607.1-201ENST00000524456 203 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AL158211.2-201ENST00000607282 395 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AL138478.1-201ENST00000612252 832 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC079597.1-201ENST00000624306 508 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 OR5H6-203ENST00000642105 978 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RNU6-359P-201ENST00000365466 108 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RNU6-754P-201ENST00000391166 107 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AL603865.2-201ENST00000401679 213 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 TIMM9P2-201ENST00000419324 266 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 TAAR7P-201ENST00000436141 242 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RPL26P6-201ENST00000440913 438 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 MTCO2P25-201ENST00000447065 681 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC097493.1-201ENST00000463958 372 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AL049714.1-201ENST00000466686 347 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RPL30P5-201ENST00000494923 336 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC093677.1-201ENST00000514414 678 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RNU6-798P-201ENST00000516912 103 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RNU1-104P-201ENST00000517280 175 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 DUXAP5-201ENST00000529668 529 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC124947.2-202ENST00000552735 133 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 MIR3609-201ENST00000582661 80 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AP001429.1-201ENST00000602568 530 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC004853.1-201ENST00000604902 698 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AL158211.4-201ENST00000606988 584 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC004067.1-201ENST00000608733 700 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 AC022513.1-201ENST00000624512 117 ntBASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.75□□□□□ -2.13
SHANK3Q9BYB0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNU6-28P-201ENST00000362378 107 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNU6-198P-201ENST00000384258 104 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 MIR524-201ENST00000385242 87 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNF2P1-201ENST00000442955 1010 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RPS20P20-201ENST00000460498 340 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RPL23AP41-201ENST00000484754 458 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC104629.1-201ENST00000494226 508 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC114801.2-201ENST00000503825 781 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNU6-528P-201ENST00000516926 100 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 SNORA31.22-201ENST00000517204 135 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL138976.2-201ENST00000563989 694 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC068338.1-201ENST00000565567 176 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC021749.1-201ENST00000604322 607 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL161729.4-201ENST00000604650 476 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL031601.2-202ENST00000622650 282 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC090772.4-201ENST00000623599 362 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC116618.1-201ENST00000634617 774 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AP000560.1-201ENST00000624150 1937 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNU5A-1-201ENST00000362698 116 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RNU6-223P-201ENST00000362830 107 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 MIR767-201ENST00000390228 109 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC019070.1-201ENST00000415008 1024 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC019178.2-201ENST00000423595 505 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 RPL7L1P10-201ENST00000427790 463 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC114981.1-201ENST00000503897 678 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC114322.1-201ENST00000506771 926 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC093752.1-206ENST00000511823 336 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC008837.2-201ENST00000513076 418 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AP003033.1-201ENST00000527244 415 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 BNIP3P26-201ENST00000600827 554 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL449363.1-201ENST00000617815 186 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC084824.4-201ENST00000620106 731 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AC009268.2-201ENST00000621925 457 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL359851.1-201ENST00000569460 4997 ntBASIC1.74□□□□□ -2.13
SHANK3Q9BYB0 AL049641.1-201ENST00000441055 1948 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms