Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
EPHB3P54753 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
EPHB3P54753 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
EPHB3P54753 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 RNU6-1303P-201ENST00000364841 107 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.24□□□□□ -1.73
EPHB3P54753 RNU6-746P-201ENST00000384112 109 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 AL590704.1-201ENST00000402856 794 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 RPS12P23-201ENST00000419579 400 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AL160275.3-201ENST00000423876 471 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 CYCSP43-201ENST00000438233 310 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AC104332.1-201ENST00000440471 797 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.24□□□□□ -1.73
EPHB3P54753 NEFMP1-201ENST00000443423 1006 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.24□□□□□ -1.73
EPHB3P54753 HMGB1P25-201ENST00000468402 607 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 RPL7P5-201ENST00000471472 736 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.24□□□□□ -1.73
EPHB3P54753 RPL7P23-201ENST00000493874 747 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AC069113.1-201ENST00000517763 267 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.24□□□□□ -1.73
EPHB3P54753 AC103783.1-201ENST00000520506 373 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AP003733.2-201ENST00000529409 171 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
EPHB3P54753 AC104763.2-201ENST00000604179 382 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AC006023.2-201ENST00000609916 167 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 AL591516.1-201ENST00000611326 274 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
EPHB3P54753 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
EPHB3P54753 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.24□□□□□ -1.73
EPHB3P54753 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EPHB3P54753 AC027287.1-201ENST00000553115 1453 ntBASIC4.24□□□□□ -1.73
EPHB3P54753 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
EPHB3P54753 AL359893.1-201ENST00000447628 1580 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
EPHB3P54753 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 Y_RNA.29-201ENST00000362570 113 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RNY1P16-201ENST00000363063 111 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 RNU6-213P-201ENST00000384051 104 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 Y_RNA.462-201ENST00000384268 102 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 SNORA51.11-201ENST00000384442 131 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RNA5SP372-201ENST00000390836 115 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 MTCO2P33-201ENST00000402100 465 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RNU2-71P-201ENST00000411395 189 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.23□□□□□ -1.73
EPHB3P54753 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.23□□□□□ -1.73
EPHB3P54753 TBCAP1-201ENST00000436520 327 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RPS3AP46-201ENST00000448352 682 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RPL29P29-201ENST00000448725 423 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RPS11P1-201ENST00000451072 473 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 AC234775.1-201ENST00000454247 670 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RPL37P6-201ENST00000460682 294 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RPL23AP2-201ENST00000471227 466 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 AC018437.1-201ENST00000492214 406 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RNU5B-3P-201ENST00000516601 115 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RN7SKP60-201ENST00000516985 239 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 RNU6-570P-201ENST00000517051 105 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 AC109329.1-201ENST00000518744 317 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.23□□□□□ -1.73
EPHB3P54753 AC007390.2-201ENST00000606229 3803 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
EPHB3P54753 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EPHB3P54753 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.23□□□□□ -1.73
EPHB3P54753 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.23□□□□□ -1.73
EPHB3P54753 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
EPHB3P54753 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
EPHB3P54753 RNU6-212P-201ENST00000362642 104 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 RNY3P11-201ENST00000364153 102 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 RNY1-201ENST00000364228 113 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 RNU6-14P-201ENST00000384630 106 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms