Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC099654.12-201ENST00000639868 649 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 AC073869.6-201ENST00000640656 341 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 MTCO1P9-201ENST00000505577 1534 ntBASIC2.45□□□□□ -2.02
HDAC3O15379 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 TPTE2P4-201ENST00000258589 1605 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNU6-525P-201ENST00000363685 104 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNU6-461P-201ENST00000364195 107 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDAC3O15379 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDAC3O15379 SNORA6-201ENST00000384033 151 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 MIR548F1-201ENST00000408667 84 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNU6-516P-201ENST00000411381 104 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 CCDC58P2-201ENST00000417131 366 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RPS15AP12-201ENST00000419498 388 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 PPP1R11P2-201ENST00000423543 382 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC004866.2-201ENST00000438285 481 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 RPL26P6-201ENST00000440913 438 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HDAC3O15379 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 AL139109.1-201ENST00000455491 297 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC093899.1-201ENST00000457984 376 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RPL31P41-201ENST00000477967 372 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RPL23AP41-201ENST00000484754 458 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RPL9P6-201ENST00000492764 598 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AC010587.1-201ENST00000505809 469 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 RNA5SP337-201ENST00000517007 109 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.44□□□□□ -2.02
HDAC3O15379 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HDAC3O15379 AC005951.2-201ENST00000576282 495 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 OR1M4P-201ENST00000589199 287 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AP003465.2-201ENST00000602571 373 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AL022154.1-201ENST00000604698 785 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
HDAC3O15379 uc_338.12-201ENST00000616344 181 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 MIR6130-201ENST00000619419 109 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 AC009268.2-201ENST00000621925 457 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 OR5AK4P-201ENST00000635912 903 ntBASIC2.44□□□□□ -2.02
HDAC3O15379 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HDAC3O15379 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDAC3O15379 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
HDAC3O15379 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.43□□□□□ -2.02
HDAC3O15379 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HDAC3O15379 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HDAC3O15379 SNORD62.1-201ENST00000362541 86 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 RNY3P13-201ENST00000365542 102 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HDAC3O15379 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 RPL23AP32-201ENST00000395315 459 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AL513331.1-201ENST00000411908 397 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC3O15379 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC024082.2-201ENST00000434771 238 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 NDUFB4P6-201ENST00000436819 366 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC005094.1-201ENST00000440420 368 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 RPS24P13-201ENST00000442520 397 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC3O15379 MTND1P9-201ENST00000453775 944 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 MTND1P12-201ENST00000455231 147 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC3O15379 RPS27P26-201ENST00000494583 239 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 HMGB3P3-201ENST00000510526 400 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC022483.1-201ENST00000514020 567 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC3O15379 RNU6-64P-201ENST00000517119 105 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 MTCO2P4-201ENST00000517968 247 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 COX6CP5-201ENST00000527162 228 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HDAC3O15379 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HDAC3O15379 DEFB108A-201ENST00000530110 222 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.43□□□□□ -2.02
HDAC3O15379 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.43□□□□□ -2.02
HDAC3O15379 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.43□□□□□ -2.02
HDAC3O15379 MED28P6-201ENST00000558776 231 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.43□□□□□ -2.02
HDAC3O15379 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.43□□□□□ -2.02
HDAC3O15379 RPS15AP11-201ENST00000594193 385 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AL645944.1-201ENST00000603857 493 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC121334.2-201ENST00000605387 271 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC012443.1-201ENST00000605605 231 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC126118.1-201ENST00000607744 628 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC093732.2-201ENST00000607950 274 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC004067.1-201ENST00000608733 700 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC004908.2-201ENST00000609090 574 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC103710.2-201ENST00000609912 942 ntBASIC2.43□□□□□ -2.02
HDAC3O15379 AC109347.2-201ENST00000610220 349 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms