Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-1257P-201ENST00000384625 110 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 MIR627-201ENST00000384979 97 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 RNA5SP354-201ENST00000391247 136 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL030996.1-201ENST00000411430 235 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 MTND1P21-201ENST00000412991 285 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 TPMTP2-201ENST00000414372 726 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL445305.1-201ENST00000432577 575 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 SDCBPP1-201ENST00000440192 890 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC010099.1-201ENST00000455434 375 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 SNRPFP3-201ENST00000457792 225 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 snoU13.28-201ENST00000459235 104 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 DYNLL1P5-201ENST00000467158 270 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC022493.1-201ENST00000492984 337 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 OR5BM1P-201ENST00000512021 366 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC008739.2-201ENST00000597006 317 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AC011451.2-201ENST00000604303 598 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AP000254.1-201ENST00000609934 520 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL357080.1-201ENST00000617394 239 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 AL596245.1-201ENST00000618994 362 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 MIR1322-201ENST00000638013 71 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 SDAD1P2-201ENST00000441308 2028 ntBASIC1.78□□□□□ -2.12
SHANK3Q9BYB0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.78□□□□□ -2.13
SHANK3Q9BYB0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 MIR135A2-201ENST00000384854 100 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 SNORD65.1-201ENST00000390889 71 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 RNA5SP252-201ENST00000391131 119 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 MRPS36P1-201ENST00000421291 307 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL590233.1-201ENST00000430017 456 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 RPL35AP22-201ENST00000436855 335 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL592447.1-201ENST00000447592 540 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 ARPC3P5-201ENST00000448802 534 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC016550.1-201ENST00000505348 785 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC022861.1-201ENST00000522981 663 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 SLC2A13P1-201ENST00000531560 322 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC005832.3-201ENST00000537929 631 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC023813.2-201ENST00000564321 469 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC090615.1-201ENST00000577519 154 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 NUTF2P8-201ENST00000604593 363 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL512427.1-201ENST00000618593 349 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC002550.2-201ENST00000621246 394 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC126544.2-201ENST00000625174 749 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 RNU6-1078P-201ENST00000364522 103 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 snoZ40.1-201ENST00000364540 72 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 MIR216A-201ENST00000385063 110 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 HMGB1P17-201ENST00000403495 628 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 RNU6-193P-201ENST00000410977 107 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL365496.1-201ENST00000426885 215 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AP000907.2-201ENST00000530827 353 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 AC006213.4-201ENST00000616184 634 ntBASIC1.77□□□□□ -2.13
SHANK3Q9BYB0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 TXNP7-201ENST00000406296 293 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 USP9YP13-201ENST00000417797 480 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 EBAG9P1-201ENST00000418955 543 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 RPS3AP44-201ENST00000425466 790 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 THAP5P1-201ENST00000439089 262 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 BMI1P1-201ENST00000445879 941 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 COX6CP12-201ENST00000446748 202 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 SNRPGP6-201ENST00000451124 220 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 RPL18AP17-201ENST00000455326 198 ntBASIC1.76□□□□□ -2.13
SHANK3Q9BYB0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms