Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXD4Q12950 AL353729.1-201ENST00000425044 720 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 SUMO1P4-201ENST00000429430 302 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AC236972.1-201ENST00000433225 199 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AC002486.1-201ENST00000435098 391 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 HMGB3P12-201ENST00000438745 556 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 DNAJC19P4-201ENST00000440115 345 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXD4Q12950 MRPS31P2-201ENST00000451581 518 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 NIPA2P5-201ENST00000452282 464 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AL162395.1-201ENST00000457882 422 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AP001486.1-201ENST00000463339 476 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 RPL39P36-201ENST00000490784 156 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 SCARNA17.1-201ENST00000516211 143 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 SCARNA17.2-201ENST00000516334 143 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 RNA5SP164-201ENST00000516533 110 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 RNU6-314P-201ENST00000516574 104 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 OR5B10P-201ENST00000532869 642 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXD4Q12950 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
FOXD4Q12950 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 AC138761.3-201ENST00000579993 334 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.33□□□□□ -1.88
FOXD4Q12950 AC104763.2-201ENST00000604179 382 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AP000787.2-201ENST00000604432 568 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD4Q12950 AP001596.2-201ENST00000608410 312 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AC092954.2-201ENST00000609103 430 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 SCARNA17.4-201ENST00000614296 143 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 AC099654.12-201ENST00000639868 649 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 AL732372.2-225ENST00000642124 456 ntBASIC3.33□□□□□ -1.88
FOXD4Q12950 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD4Q12950 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
FOXD4Q12950 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
FOXD4Q12950 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXD4Q12950 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD4Q12950 OR4G2P-201ENST00000328113 903 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 VTRNA1-1-201ENST00000363120 99 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 RNA5SP267-201ENST00000364893 126 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 Y_RNA.554-201ENST00000384672 102 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 MIR128-1-201ENST00000384921 82 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 MIR548F1-201ENST00000408667 84 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD4Q12950 MTCO2P19-201ENST00000427513 598 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXD4Q12950 AC073464.1-201ENST00000429823 534 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 RPS20P5-201ENST00000434808 360 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC104389.3-201ENST00000445629 235 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXD4Q12950 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXD4Q12950 AL441985.1-201ENST00000457727 251 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC093899.1-201ENST00000457984 376 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 RPS29P15-201ENST00000458329 171 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC023194.1-201ENST00000493084 308 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AIG1P1-201ENST00000503376 148 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.32□□□□□ -1.88
FOXD4Q12950 Y_RNA.704-201ENST00000516851 102 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 RN7SKP60-201ENST00000516985 239 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD4Q12950 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD4Q12950 OR5AL2P-201ENST00000532185 920 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD4Q12950 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD4Q12950 AC068790.2-201ENST00000602601 557 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 BNIP3P9-201ENST00000603714 553 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 MIR6852-201ENST00000621699 66 ntBASIC3.32□□□□□ -1.88
FOXD4Q12950 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXD4Q12950 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD4Q12950 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD4Q12950 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXD4Q12950 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXD4Q12950 AC027514.1-201ENST00000588561 1603 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXD4Q12950 Y_RNA.619-201ENST00000410951 90 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 UBE2V1P10-201ENST00000414685 269 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AL031779.1-201ENST00000415663 330 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXD4Q12950 AL591419.1-201ENST00000427423 339 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 RPL36AP6-201ENST00000435770 321 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXD4Q12950 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 GZMAP1-201ENST00000503054 631 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXD4Q12950 AC108078.2-201ENST00000510750 236 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 RN7SKP18-201ENST00000516005 275 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 RNU6-123P-201ENST00000516163 102 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 OR5BN1P-201ENST00000532955 829 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC023824.2-201ENST00000566185 400 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC024153.1-201ENST00000603103 365 ntBASIC3.31□□□□□ -1.88
FOXD4Q12950 AC008536.2-201ENST00000607284 349 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms