Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU4-50P-201ENST00000364361 141 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 RNU6-45P-201ENST00000384471 107 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 RNU6ATAC-201ENST00000408749 126 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AL137014.1-201ENST00000420490 1226 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.27□□□□□ -1.73
EPHB3P54753 AL358472.1-201ENST00000431295 329 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC007389.2-201ENST00000434630 306 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
EPHB3P54753 DAP3P1-201ENST00000441522 278 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AL121871.1-201ENST00000443413 436 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.27□□□□□ -1.73
EPHB3P54753 Y_RNA.689-201ENST00000516589 107 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 SNORA40.15-201ENST00000516884 107 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC008694.2-201ENST00000517591 306 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 ERHP1-201ENST00000523006 310 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
EPHB3P54753 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
EPHB3P54753 HSPE1P5-201ENST00000561489 272 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC090517.1-201ENST00000569307 266 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC006600.1-201ENST00000572529 153 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC012433.1-201ENST00000588916 398 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC067852.3-201ENST00000589177 561 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC012119.1-201ENST00000603184 222 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC002044.1-201ENST00000606707 158 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 AC130454.1-201ENST00000622948 401 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.27□□□□□ -1.73
EPHB3P54753 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
EPHB3P54753 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
EPHB3P54753 ZNF72P-201ENST00000425869 1908 ntBASIC4.27□□□□□ -1.73
EPHB3P54753 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EPHB3P54753 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.26□□□□□ -1.73
EPHB3P54753 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
EPHB3P54753 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EPHB3P54753 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
EPHB3P54753 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.26□□□□□ -1.73
EPHB3P54753 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
EPHB3P54753 Y_RNA.416-201ENST00000384014 113 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 RNU6-339P-201ENST00000384310 107 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.26□□□□□ -1.73
EPHB3P54753 AL031274.1-201ENST00000450334 232 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 MED28P2-201ENST00000475771 317 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 HMGB1P35-201ENST00000503360 598 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
EPHB3P54753 SNORA81.3-201ENST00000517283 198 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 IGKV2D-23-201ENST00000518179 286 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 CR383656.7-201ENST00000548164 174 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.26□□□□□ -1.73
EPHB3P54753 VN1R91P-201ENST00000594377 169 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.26□□□□□ -1.73
EPHB3P54753 MIR92B-201ENST00000607575 96 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AC006329.2-201ENST00000611491 394 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AC006133.1-201ENST00000617106 264 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.26□□□□□ -1.73
EPHB3P54753 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.26□□□□□ -1.73
EPHB3P54753 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EPHB3P54753 NOL8P1-201ENST00000508336 3529 ntBASIC4.26□□□□□ -1.73
EPHB3P54753 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
EPHB3P54753 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.25□□□□□ -1.73
EPHB3P54753 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
EPHB3P54753 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 MIR153-1-201ENST00000384914 90 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 PTMAP2-201ENST00000397627 327 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 MIR548H3-201ENST00000408771 118 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AC092809.3-201ENST00000415453 231 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 AL353997.1-201ENST00000432936 108 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 PCMTD1P1-201ENST00000455560 355 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 PRELID3BP1-201ENST00000457142 540 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 TRBVB-201ENST00000477100 408 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AP000926.1-201ENST00000479573 241 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 SNORA67.7-201ENST00000516664 135 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 RNU6-352P-201ENST00000516908 107 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 RNU6-677P-201ENST00000516914 101 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 RNU6-897P-201ENST00000517135 105 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.25□□□□□ -1.73
EPHB3P54753 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.25□□□□□ -1.73
EPHB3P54753 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.25□□□□□ -1.73
EPHB3P54753 MIR4429-201ENST00000580105 73 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 MIR3158-1-201ENST00000583596 81 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
EPHB3P54753 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
EPHB3P54753 AC007619.2-201ENST00000605743 379 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 MIR6130-201ENST00000619419 109 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AL159153.1-201ENST00000619688 317 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 AL354798.1-201ENST00000622505 329 ntBASIC4.25□□□□□ -1.73
EPHB3P54753 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms