Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AP003973.1-201ENST00000604639 691 ntBASIC0.57□□□□□ -2.32
GAFA1Q96PS6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
GAFA1Q96PS6 AL589743.7-201ENST00000612637 233 ntBASIC0.57□□□□□ -2.32
GAFA1Q96PS6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
GAFA1Q96PS6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 Y_RNA.224-201ENST00000364308 111 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 RNU6-1226P-201ENST00000384317 107 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 RNU1-78P-201ENST00000391248 165 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 RPL37P10-201ENST00000412884 288 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 MTND5P15-201ENST00000434246 349 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AL589880.1-201ENST00000448271 287 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 OR9N1P-202ENST00000494289 481 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC114786.4-201ENST00000508771 728 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AL359273.1-201ENST00000510918 627 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC114797.1-201ENST00000514003 728 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 HAUS1P3-201ENST00000523909 662 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AL391261.3-201ENST00000557194 520 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC105245.1-201ENST00000581934 244 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 HMGN2P15-201ENST00000585707 270 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC090116.1-201ENST00000615679 446 ntBASIC0.56□□□□□ -2.32
GAFA1Q96PS6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.56□□□□□ -2.32
GAFA1Q96PS6 AC009541.1-201ENST00000438279 2662 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 Y_RNA.238-201ENST00000364441 102 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 SNORA25.8-201ENST00000364831 128 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 RNU6-17P-201ENST00000384245 107 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 RNU6-452P-201ENST00000384406 107 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 RNU6-18P-201ENST00000384527 107 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 MIR146A-201ENST00000385201 99 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 SSXP10-201ENST00000402595 565 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 U6atac.2-201ENST00000408644 118 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 MIR548J-201ENST00000408833 112 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC023141.4-201ENST00000412031 328 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AL354941.1-201ENST00000438600 464 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AL133373.1-201ENST00000497098 94 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC098591.2-201ENST00000510152 315 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AP003034.1-201ENST00000534621 422 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 NIFKP6-201ENST00000598115 845 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC025588.3-201ENST00000604182 274 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 AC005021.1-201ENST00000608730 355 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
GAFA1Q96PS6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
GAFA1Q96PS6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC027514.1-201ENST00000588561 1603 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 Y_RNA.226-201ENST00000364337 114 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 SNORA40.19-201ENST00000390846 128 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC245047.4-201ENST00000433189 144 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 PRPS1P1-201ENST00000445305 876 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 RPS4XP11-201ENST00000446897 772 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 RPS20P20-201ENST00000460498 340 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 RPL9P9-202ENST00000466501 579 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AL049714.1-201ENST00000466686 347 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC109927.2-201ENST00000506416 303 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC112198.4-201ENST00000515450 351 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 RNU6-902P-201ENST00000517212 91 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AL590095.2-201ENST00000604136 117 ntBASIC0.54□□□□□ -2.32
GAFA1Q96PS6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
GAFA1Q96PS6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 RNU6-750P-201ENST00000390946 107 ntBASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AC009238.1-201ENST00000442165 424 ntBASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AC009237.6-201ENST00000446969 424 ntBASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AC104057.1-201ENST00000515547 497 ntBASIC0.53□□□□□ -2.32
GAFA1Q96PS6 RNA5SP490-201ENST00000517141 136 ntBASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.53□□□□□ -2.32
GAFA1Q96PS6 AL137100.2-201ENST00000555786 315 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 380.1 ms