Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AP000867.2-201ENST00000532468 320 ntBASIC4.12□□□□□ -1.75
KLF4O43474 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.12□□□□□ -1.75
KLF4O43474 ELOCP31-201ENST00000540463 467 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.12□□□□□ -1.75
KLF4O43474 RPL23AP97-201ENST00000568955 471 ntBASIC4.12□□□□□ -1.75
KLF4O43474 MTND6P33-201ENST00000571794 183 ntBASIC4.12□□□□□ -1.75
KLF4O43474 BPIFA4P-203ENST00000603168 689 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC083809.1-201ENST00000615051 472 ntBASIC4.12□□□□□ -1.75
KLF4O43474 MIR6758-201ENST00000620653 63 ntBASIC4.12□□□□□ -1.75
KLF4O43474 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KLF4O43474 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KLF4O43474 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
KLF4O43474 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KLF4O43474 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
KLF4O43474 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KLF4O43474 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
KLF4O43474 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 AC068254.2-201ENST00000623938 3577 ntBASIC4.11□□□□□ -1.75
KLF4O43474 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RNU6-858P-201ENST00000362436 107 ntBASIC4.11□□□□□ -1.75
KLF4O43474 Y_RNA.28-201ENST00000362554 111 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RNU1-94P-201ENST00000362627 173 ntBASIC4.11□□□□□ -1.75
KLF4O43474 SNORD6-201ENST00000365444 73 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RPS29P13-201ENST00000402041 169 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RNU6-55P-201ENST00000411092 107 ntBASIC4.11□□□□□ -1.75
KLF4O43474 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC092017.2-201ENST00000427600 362 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC011816.1-201ENST00000441346 546 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AL137792.2-201ENST00000443484 235 ntBASIC4.11□□□□□ -1.75
KLF4O43474 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.11□□□□□ -1.75
KLF4O43474 AL035666.1-201ENST00000446195 348 ntBASIC4.11□□□□□ -1.75
KLF4O43474 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.11□□□□□ -1.75
KLF4O43474 TPT1P12-201ENST00000448968 492 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RN7SL385P-201ENST00000468873 276 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RPS26P28-201ENST00000470806 348 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC022493.2-201ENST00000506122 481 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC015795.1-201ENST00000513669 327 ntBASIC4.11□□□□□ -1.75
KLF4O43474 Y_RNA.661-201ENST00000516003 99 ntBASIC4.11□□□□□ -1.75
KLF4O43474 RNA5SP384-201ENST00000516615 116 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC021739.1-201ENST00000559631 174 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC020895.1-201ENST00000595362 272 ntBASIC4.11□□□□□ -1.75
KLF4O43474 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.11□□□□□ -1.75
KLF4O43474 AC016925.2-201ENST00000605108 242 ntBASIC4.11□□□□□ -1.75
KLF4O43474 AC005046.1-201ENST00000608515 625 ntBASIC4.11□□□□□ -1.75
KLF4O43474 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.11□□□□□ -1.75
KLF4O43474 U3.53-201ENST00000628922 216 ntBASIC4.11□□□□□ -1.75
KLF4O43474 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
KLF4O43474 CDC27P3-201ENST00000635418 1910 ntBASIC4.11□□□□□ -1.75
KLF4O43474 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KLF4O43474 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 AL158163.1-201ENST00000603915 1649 ntBASIC4.1□□□□□ -1.75
KLF4O43474 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KLF4O43474 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KLF4O43474 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KLF4O43474 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
KLF4O43474 AC021146.4-201ENST00000309229 279 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RNU6-227P-201ENST00000362865 103 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RN7SKP227-201ENST00000364445 330 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RNU6-336P-201ENST00000364891 107 ntBASIC4.1□□□□□ -1.75
KLF4O43474 Y_RNA.428-201ENST00000384078 102 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RNU6-198P-201ENST00000384258 104 ntBASIC4.1□□□□□ -1.75
KLF4O43474 MIR129-1-201ENST00000384972 72 ntBASIC4.1□□□□□ -1.75
KLF4O43474 U3.22-201ENST00000391120 215 ntBASIC4.1□□□□□ -1.75
KLF4O43474 BTF3L4P2-201ENST00000392798 346 ntBASIC4.1□□□□□ -1.75
KLF4O43474 Z98745.1-201ENST00000402553 494 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RNA5SP38-201ENST00000410750 119 ntBASIC4.1□□□□□ -1.75
KLF4O43474 EIF4EP2-201ENST00000422816 654 ntBASIC4.1□□□□□ -1.75
KLF4O43474 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.1□□□□□ -1.75
KLF4O43474 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
KLF4O43474 RPS23P7-201ENST00000466210 444 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RPS29P20-201ENST00000489592 171 ntBASIC4.1□□□□□ -1.75
KLF4O43474 RN7SL812P-201ENST00000493791 279 ntBASIC4.1□□□□□ -1.75
KLF4O43474 AC146944.2-203ENST00000502493 354 ntBASIC4.1□□□□□ -1.75
KLF4O43474 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 AC139495.1-202ENST00000513164 354 ntBASIC4.1□□□□□ -1.75
KLF4O43474 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.1□□□□□ -1.75
KLF4O43474 MTCO3P13-201ENST00000577757 781 ntBASIC4.1□□□□□ -1.75
KLF4O43474 BNIP3P16-201ENST00000589779 534 ntBASIC4.1□□□□□ -1.75
KLF4O43474 AC083806.3-201ENST00000614016 455 ntBASIC4.1□□□□□ -1.75
KLF4O43474 AL021997.2-201ENST00000615674 271 ntBASIC4.1□□□□□ -1.75
KLF4O43474 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KLF4O43474 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KLF4O43474 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.1□□□□□ -1.75
KLF4O43474 AC066616.2-201ENST00000559334 1481 ntBASIC4.1□□□□□ -1.75
KLF4O43474 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms