Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC084357.1-201ENST00000473404 255 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 HMGN2P13-201ENST00000476476 274 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC105758.1-201ENST00000506038 399 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 SNORA40.14-201ENST00000516543 86 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 RNU4-77P-201ENST00000516692 156 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC091144.1-201ENST00000519573 138 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC090281.1-201ENST00000523019 276 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 Z98751.3-201ENST00000604447 521 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC100812.1-201ENST00000607622 580 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AL592182.3-201ENST00000642132 3304 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 AC008669.1-201ENST00000565823 2178 ntBASIC5.09□□□□□ -1.59
TMEM88BA6NKF7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
TMEM88BA6NKF7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.09□□□□□ -1.6
TMEM88BA6NKF7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.6
TMEM88BA6NKF7 MTND5P27-201ENST00000428871 1720 ntBASIC5.09□□□□□ -1.6
TMEM88BA6NKF7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TMEM88BA6NKF7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC112198.2-201ENST00000426589 6996 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.556-201ENST00000384677 113 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 HMGN2P30-201ENST00000423237 256 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 MTATP6P7-201ENST00000453315 681 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC112492.4-201ENST00000456549 352 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 RNU6-635P-201ENST00000516651 102 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 IGKV2D-19-201ENST00000523346 262 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC103996.1-201ENST00000555468 102 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC120057.2-201ENST00000571520 271 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AC104695.3-201ENST00000604052 296 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AL034408.1-202ENST00000636088 415 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 AL672296.1-201ENST00000427780 2158 ntBASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.08□□□□□ -1.6
TMEM88BA6NKF7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 RNU6-702P-201ENST00000364982 107 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 HMGB3P2-201ENST00000411913 584 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 RPL26P27-201ENST00000414397 437 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC013470.1-201ENST00000453438 462 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 FO393415.2-201ENST00000480085 343 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC074250.1-201ENST00000511117 192 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 RNU6-612P-201ENST00000516909 102 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC004584.2-201ENST00000570407 410 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 MIR3690-201ENST00000580266 75 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AL355297.3-201ENST00000604082 446 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC124312.5-201ENST00000604451 268 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AC005000.2-201ENST00000605468 310 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 AL445487.1-201ENST00000415694 1580 ntBASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.07□□□□□ -1.6
TMEM88BA6NKF7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AC091812.1-201ENST00000432235 1948 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.48-201ENST00000362710 103 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RNU1-83P-201ENST00000363426 164 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RNA5SP175-201ENST00000364275 119 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RNU6-574P-201ENST00000384265 107 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.645-201ENST00000391229 102 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RNA5SP239-201ENST00000410218 129 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 SNORA57.3-201ENST00000411095 141 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 CYCSP32-201ENST00000440548 321 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 HIGD1AP2-201ENST00000446367 280 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AL353752.1-201ENST00000454946 260 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AC110794.1-201ENST00000505816 425 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 NDUFB4P9-201ENST00000511646 388 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AC005476.1-201ENST00000554427 397 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 LINC00933-203ENST00000559812 219 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 FTX_3.1-201ENST00000610451 147 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 HMGB1P24-202ENST00000615653 685 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 SCARNA15.3-201ENST00000626315 122 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms