Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNA5SP219-201ENST00000390940 113 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 CISD1P1-201ENST00000393907 327 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AL139039.1-201ENST00000401900 692 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.86□□□□□ -1.79
PNKPQ96T60 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.86□□□□□ -1.79
PNKPQ96T60 MTCYBP6-201ENST00000441810 138 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AP001086.1-201ENST00000494882 321 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.86□□□□□ -1.79
PNKPQ96T60 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PNKPQ96T60 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AP003072.1-201ENST00000531740 145 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AP000889.2-201ENST00000532684 490 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AC008011.1-201ENST00000545989 227 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AL442663.2-201ENST00000554385 511 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.86□□□□□ -1.79
PNKPQ96T60 AL138889.2-201ENST00000603883 242 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AC104763.2-201ENST00000604179 382 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 RNA5SP108-201ENST00000605921 117 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 RNU1-30P-201ENST00000606575 163 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AL365204.3-201ENST00000612448 685 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 AL359757.2-201ENST00000624309 274 ntBASIC3.86□□□□□ -1.79
PNKPQ96T60 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PNKPQ96T60 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PNKPQ96T60 AC007656.2-201ENST00000624902 4547 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PNKPQ96T60 Y_RNA.132-201ENST00000363421 102 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 SNORD113-7-201ENST00000363762 77 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 Y_RNA.326-201ENST00000365176 113 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 Y_RNA.339-201ENST00000365325 102 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.85□□□□□ -1.79
PNKPQ96T60 MIR124-3-201ENST00000384866 87 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 MIR34B-201ENST00000385076 84 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PNKPQ96T60 SNORD70.1-201ENST00000391007 85 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 MIR548F5-201ENST00000408421 86 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 BX682237.1-201ENST00000415016 335 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.85□□□□□ -1.79
PNKPQ96T60 MTATP6P4-201ENST00000427725 675 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RPS6P12-201ENST00000432491 726 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RPS3AP52-201ENST00000435639 297 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 NDUFA5P4-201ENST00000436704 385 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RPL26P6-201ENST00000440913 438 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.85□□□□□ -1.79
PNKPQ96T60 AC104058.1-201ENST00000448028 297 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RPS3AP46-201ENST00000448352 682 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RN7SL442P-201ENST00000473804 320 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 HMGN1P10-201ENST00000474557 553 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 MTCO1P29-201ENST00000496868 288 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 TRBVA-201ENST00000498804 316 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 TBCAP3-201ENST00000512475 312 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RNU6-189P-201ENST00000516120 101 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 RNU6-559P-201ENST00000516151 98 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.85□□□□□ -1.79
PNKPQ96T60 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.85□□□□□ -1.79
PNKPQ96T60 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PNKPQ96T60 AC106782.4-201ENST00000568264 210 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.85□□□□□ -1.79
PNKPQ96T60 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.85□□□□□ -1.79
PNKPQ96T60 AL670379.10-201ENST00000604330 253 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 APOOP1-201ENST00000604695 592 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 ATP1B3P1-201ENST00000605365 821 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AL670379.9-201ENST00000605428 253 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 AC009570.1-201ENST00000609599 745 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 uc_338.32-201ENST00000615087 172 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.85□□□□□ -1.79
PNKPQ96T60 MTND4LP32-201ENST00000636111 270 ntBASIC3.85□□□□□ -1.79
PNKPQ96T60 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PNKPQ96T60 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.85□□□□□ -1.79
PNKPQ96T60 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.85□□□□□ -1.79
PNKPQ96T60 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 RNU6-190P-201ENST00000384154 102 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 MIR218-2-201ENST00000385006 110 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.579-201ENST00000390939 94 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 SNORA16.2-201ENST00000390991 127 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 RNU6-1304P-201ENST00000411374 106 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 RPS15AP6-201ENST00000420703 385 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC244098.2-201ENST00000422068 99 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.84□□□□□ -1.79
PNKPQ96T60 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 PRDX3P3-201ENST00000447765 522 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.84□□□□□ -1.79
PNKPQ96T60 AC006539.3-201ENST00000454258 129 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 DYNLL1P5-201ENST00000467158 270 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 VN1R17P-201ENST00000472048 1090 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.84□□□□□ -1.79
PNKPQ96T60 GMPSP1-201ENST00000514075 579 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 RN7SKP258-201ENST00000517151 304 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms