Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 AL359837.1-201ENST00000381357 287 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 MIR23B-201ENST00000384832 97 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 MIR517A-201ENST00000385001 87 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AL691449.1-201ENST00000426570 421 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.32□□□□□ -1.72
EPHB3P54753 RPS29P7-201ENST00000439662 171 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHB3P54753 FCF1P4-201ENST00000448326 183 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 FABP5P13-201ENST00000452144 328 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC133473.1-201ENST00000455173 299 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RNU7-187P-201ENST00000458985 68 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC008481.1-201ENST00000463278 396 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RPL21P103-201ENST00000479921 488 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC108860.1-201ENST00000484521 383 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC011005.2-201ENST00000487324 359 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RPL17P19-201ENST00000489069 552 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RPL29P14-201ENST00000495837 428 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHB3P54753 RNU6-182P-201ENST00000516970 105 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RN7SKP234-201ENST00000517173 224 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHB3P54753 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.32□□□□□ -1.72
EPHB3P54753 AC120057.2-201ENST00000571520 271 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 AC174048.1-201ENST00000603389 144 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AL031176.1-201ENST00000604554 466 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 RAC1P9-201ENST00000604990 392 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC099669.2-201ENST00000616549 437 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 MIR6500-201ENST00000622700 86 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC007998.5-201ENST00000622938 237 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 AC110801.1-201ENST00000623590 212 ntBASIC4.32□□□□□ -1.72
EPHB3P54753 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHB3P54753 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
EPHB3P54753 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
EPHB3P54753 Y_RNA.180-201ENST00000363867 113 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 RNU6-596P-201ENST00000365395 98 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 Y_RNA.477-201ENST00000384352 108 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 SNORA19-201ENST00000384737 128 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 RNA5SP111-201ENST00000411386 101 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 MTND5P15-201ENST00000434246 349 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC008264.1-201ENST00000447612 367 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 FTH1P25-201ENST00000447665 469 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AL162389.1-201ENST00000449233 177 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC007967.1-201ENST00000455422 1159 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC146944.2-203ENST00000502493 354 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC139495.1-202ENST00000513164 354 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 RN7SKP277-201ENST00000516895 283 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 IGLVIV-53-201ENST00000520107 367 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB3P54753 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
EPHB3P54753 RN7SL703P-201ENST00000578485 302 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB3P54753 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 AC005255.1-201ENST00000593748 216 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB3P54753 TUG1_2.1-201ENST00000614234 87 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 SDR42E1P2-201ENST00000614861 481 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 SDR42E1P4-201ENST00000620894 481 ntBASIC4.31□□□□□ -1.72
EPHB3P54753 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
EPHB3P54753 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
EPHB3P54753 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB3P54753 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB3P54753 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB3P54753 AC087190.4-201ENST00000574616 8334 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB3P54753 RNU1-15P-201ENST00000353977 144 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 Y_RNA.26-201ENST00000362539 101 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 RNVU1-3-201ENST00000364313 161 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 Y_RNA.526-201ENST00000384572 110 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 RPS4XP7-201ENST00000406274 780 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 CYCSP19-201ENST00000411715 316 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 RPS23P10-201ENST00000416185 486 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 SYF2P2-201ENST00000417620 583 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 PIGPP3-201ENST00000425307 415 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 AL133396.1-201ENST00000432048 687 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB3P54753 BX276092.4-201ENST00000452056 248 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 snoU109.4-201ENST00000458953 143 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 RNU7-138P-201ENST00000459479 64 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB3P54753 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB3P54753 MTCO3P44-201ENST00000510977 541 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 Y_RNA.673-201ENST00000516306 88 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 RNU1-45P-201ENST00000517191 141 ntBASIC4.3□□□□□ -1.72
EPHB3P54753 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB3P54753 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB3P54753 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms