Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-201P-201ENST00000517100 61 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AP003181.2-201ENST00000528941 181 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL133271.1-201ENST00000538229 291 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL355836.1-201ENST00000555951 870 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL391840.1-201ENST00000571144 367 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC060771.1-201ENST00000582031 164 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC006504.3-201ENST00000586818 523 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 UBE2L4-201ENST00000587688 464 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 TPMTP1-201ENST00000592307 737 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL451007.1-201ENST00000595491 289 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC104458.1-201ENST00000608243 463 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC135507.2-201ENST00000612443 309 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AL158801.5-201ENST00000623123 465 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 AC099654.14-201ENST00000638599 341 ntBASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX43Q9NXZ2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 RNU6-223P-201ENST00000362830 107 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 RNY4P14-201ENST00000363656 96 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 UBA52P6-201ENST00000399822 382 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 FGF7P8-201ENST00000402994 292 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC078974.1-201ENST00000411597 223 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 SPA17P1-201ENST00000416656 452 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 MTND3P17-201ENST00000416968 344 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC073464.1-201ENST00000429823 534 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AL512844.2-201ENST00000433990 593 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 RPS12P18-201ENST00000442381 270 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 MTATP6P30-201ENST00000443540 664 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 RPL31P58-201ENST00000469001 379 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC092989.1-201ENST00000481235 277 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC009646.1-201ENST00000510455 318 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AP001893.2-201ENST00000526949 202 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 OR5AQ1P-201ENST00000527596 927 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 FAM92A1P1-201ENST00000528023 890 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 TUG1_2.1-201ENST00000614234 87 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 AC092794.2-201ENST00000620933 563 ntBASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX43Q9NXZ2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 MTND5P7-201ENST00000413558 1798 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 Y_RNA.9-201ENST00000362354 101 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 RNU4-1-201ENST00000363925 141 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 RNY4P34-201ENST00000364779 95 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 Y_RNA.296-201ENST00000364930 108 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AL359704.1-201ENST00000411586 781 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AL109913.1-201ENST00000421173 514 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 PIGFP2-201ENST00000421400 651 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 MTCO3P18-201ENST00000440206 761 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 NFU1P2-201ENST00000448700 469 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 RPS20P20-201ENST00000460498 340 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 RBM43P1-201ENST00000476891 1081 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC135721.1-201ENST00000497954 479 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC008549.1-201ENST00000512900 643 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AL121579.1-201ENST00000555129 305 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AMZ2P1-203ENST00000565833 850 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC005951.2-201ENST00000576282 495 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 DUXAP4-201ENST00000603046 613 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms