Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SKP202-201ENST00000410439 330 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB3P54753 AC139712.2-201ENST00000424302 339 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 PSMA2P3-201ENST00000429685 675 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB3P54753 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB3P54753 RPL23AP33-201ENST00000442301 452 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AL392103.1-201ENST00000447000 198 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 ABCF2P2-201ENST00000450549 296 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
EPHB3P54753 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB3P54753 RPL9P32-201ENST00000464118 620 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 GZMAP1-201ENST00000503054 631 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AC022447.4-201ENST00000504053 364 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
EPHB3P54753 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB3P54753 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EPHB3P54753 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB3P54753 RRN3P3-201ENST00000549207 578 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 SETP7-201ENST00000552169 453 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AC074050.1-201ENST00000563247 211 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB3P54753 AC034105.4-201ENST00000568304 277 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 MIR4458-201ENST00000578872 75 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 AL451044.1-201ENST00000604867 238 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 SNHG22-203ENST00000617833 660 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.37□□□□□ -1.71
EPHB3P54753 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
EPHB3P54753 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EPHB3P54753 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
EPHB3P54753 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
EPHB3P54753 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB3P54753 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB3P54753 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 OR56A5-201ENST00000340110 738 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 Y_RNA.214-201ENST00000364201 112 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 RNU6-200P-201ENST00000364743 107 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 SNORA23-201ENST00000365128 182 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 Y_RNA.376-201ENST00000365638 108 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 RNU6-637P-201ENST00000384050 107 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 RNU6-214P-201ENST00000384130 107 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 Y_RNA.555-201ENST00000384673 110 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 RPL21P24-201ENST00000413752 448 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 MTATP6P29-201ENST00000415057 132 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC097713.2-201ENST00000430199 356 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 AL591704.1-201ENST00000432574 275 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.36□□□□□ -1.71
EPHB3P54753 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB3P54753 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.36□□□□□ -1.71
EPHB3P54753 RPL39P38-201ENST00000467018 153 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
EPHB3P54753 VN1R105P-201ENST00000486595 910 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC025465.3-201ENST00000510570 311 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.36□□□□□ -1.71
EPHB3P54753 RNU6-27P-201ENST00000516146 107 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 AC040926.1-201ENST00000530195 238 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
EPHB3P54753 MIR5188-201ENST00000583467 113 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.36□□□□□ -1.71
EPHB3P54753 AL606490.9-201ENST00000603331 271 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB3P54753 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC091925.2-201ENST00000625059 256 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 U6.104-201ENST00000637979 90 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB3P54753 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
EPHB3P54753 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
EPHB3P54753 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.36□□□□□ -1.71
EPHB3P54753 AC008669.1-201ENST00000565823 2178 ntBASIC4.36□□□□□ -1.71
EPHB3P54753 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHB3P54753 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHB3P54753 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHB3P54753 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EPHB3P54753 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHB3P54753 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHB3P54753 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHB3P54753 Y_RNA.785-201ENST00000384290 109 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 Y_RNA.478-201ENST00000384358 107 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 MIR195-201ENST00000385194 87 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
EPHB3P54753 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.35□□□□□ -1.71
EPHB3P54753 HSPE1P12-201ENST00000412576 301 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.35□□□□□ -1.71
EPHB3P54753 GAPDHP27-201ENST00000447427 1020 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC010655.1-201ENST00000449336 292 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 CHEK2P4-201ENST00000450340 246 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC087385.1-201ENST00000475062 312 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 FO393415.2-201ENST00000480085 343 ntBASIC4.35□□□□□ -1.71
EPHB3P54753 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHB3P54753 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms