Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC244517.1-201ENST00000606030 2086 ntBASIC2.57□□□□□ -2
HDAC3O15379 TAB3P1-202ENST00000452645 1634 ntBASIC2.57□□□□□ -2
HDAC3O15379 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.57□□□□□ -2
HDAC3O15379 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
HDAC3O15379 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC3O15379 RNU6-97P-201ENST00000363387 104 ntBASIC2.57□□□□□ -2
HDAC3O15379 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.57□□□□□ -2
HDAC3O15379 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
HDAC3O15379 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
HDAC3O15379 CCNG1P1-201ENST00000406783 885 ntBASIC2.57□□□□□ -2
HDAC3O15379 RNU2-16P-201ENST00000410712 136 ntBASIC2.57□□□□□ -2
HDAC3O15379 RNU6-193P-201ENST00000410977 107 ntBASIC2.57□□□□□ -2
HDAC3O15379 AL663109.1-201ENST00000411498 844 ntBASIC2.57□□□□□ -2
HDAC3O15379 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.57□□□□□ -2
HDAC3O15379 MTND1P27-201ENST00000451117 902 ntBASIC2.57□□□□□ -2
HDAC3O15379 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC3O15379 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.57□□□□□ -2
HDAC3O15379 RPS29P26-201ENST00000477483 171 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC021382.1-201ENST00000483523 359 ntBASIC2.57□□□□□ -2
HDAC3O15379 MRPL42P6-201ENST00000486397 371 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC135721.1-201ENST00000497954 479 ntBASIC2.57□□□□□ -2
HDAC3O15379 RPS27P27-201ENST00000498779 255 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC096751.1-202ENST00000502691 1067 ntBASIC2.57□□□□□ -2
HDAC3O15379 ARL2BPP4-201ENST00000506854 471 ntBASIC2.57□□□□□ -2
HDAC3O15379 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.57□□□□□ -2
HDAC3O15379 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC3O15379 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 AP003122.4-201ENST00000530980 758 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
HDAC3O15379 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.57□□□□□ -2
HDAC3O15379 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.57□□□□□ -2
HDAC3O15379 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC079089.3-201ENST00000603094 673 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC112191.3-201ENST00000604371 277 ntBASIC2.57□□□□□ -2
HDAC3O15379 AL021997.1-201ENST00000605757 193 ntBASIC2.57□□□□□ -2
HDAC3O15379 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.57□□□□□ -2
HDAC3O15379 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
HDAC3O15379 AC092125.1-201ENST00000562568 1995 ntBASIC2.57□□□□□ -2
HDAC3O15379 Y_RNA.3-201ENST00000362331 103 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU6-1155P-201ENST00000363554 107 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU4-91P-201ENST00000364778 135 ntBASIC2.56□□□□□ -2
HDAC3O15379 Y_RNA.517-201ENST00000384551 106 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU6-114P-201ENST00000384704 105 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU6-192P-201ENST00000391253 100 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU6-248P-201ENST00000410720 107 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
HDAC3O15379 HMGN1P14-201ENST00000412459 517 ntBASIC2.56□□□□□ -2
HDAC3O15379 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.56□□□□□ -2
HDAC3O15379 AC104651.1-201ENST00000427559 735 ntBASIC2.56□□□□□ -2
HDAC3O15379 MTND4LP10-201ENST00000435146 291 ntBASIC2.56□□□□□ -2
HDAC3O15379 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC011816.1-201ENST00000441346 546 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.56□□□□□ -2
HDAC3O15379 USP9YP12-201ENST00000450481 570 ntBASIC2.56□□□□□ -2
HDAC3O15379 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDAC3O15379 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.56□□□□□ -2
HDAC3O15379 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 AC034222.1-201ENST00000494052 532 ntBASIC2.56□□□□□ -2
HDAC3O15379 MTND2P33-201ENST00000506452 1031 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.56□□□□□ -2
HDAC3O15379 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 RNU6-528P-201ENST00000516926 100 ntBASIC2.56□□□□□ -2
HDAC3O15379 RNU6-1003P-201ENST00000517099 105 ntBASIC2.56□□□□□ -2
HDAC3O15379 AP000867.2-201ENST00000532468 320 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.56□□□□□ -2
HDAC3O15379 AC123904.2-201ENST00000548059 300 ntBASIC2.56□□□□□ -2
HDAC3O15379 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 MIR4528-201ENST00000577763 90 ntBASIC2.56□□□□□ -2
HDAC3O15379 OR4K8P-201ENST00000578842 1048 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 NRBF2P5-201ENST00000603087 788 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC073648.5-201ENST00000603502 305 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC055876.5-201ENST00000605667 259 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC006566.1-201ENST00000608943 513 ntBASIC2.56□□□□□ -2
HDAC3O15379 AL355472.4-201ENST00000610233 626 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC138749.5-201ENST00000611461 208 ntBASIC2.56□□□□□ -2
HDAC3O15379 Z99129.1-201ENST00000612510 255 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC116165.2-201ENST00000616705 206 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC026585.1-201ENST00000619582 524 ntBASIC2.56□□□□□ -2
HDAC3O15379 AC002550.2-201ENST00000621246 394 ntBASIC2.56□□□□□ -2
HDAC3O15379 AL356585.4-201ENST00000623078 1229 ntBASIC2.56□□□□□ -2
HDAC3O15379 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.56□□□□□ -2
HDAC3O15379 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
HDAC3O15379 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.56□□□□□ -2
HDAC3O15379 MTND5P29-201ENST00000458676 1807 ntBASIC2.56□□□□□ -2
HDAC3O15379 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HDAC3O15379 RNU6-359P-201ENST00000365466 108 ntBASIC2.55□□□□□ -2
HDAC3O15379 SET-203ENST00000372688 801 ntTSL 2 BASIC2.55□□□□□ -2
HDAC3O15379 MIR135A2-201ENST00000384854 100 ntBASIC2.55□□□□□ -2
HDAC3O15379 Y_RNA.608-201ENST00000410647 95 ntBASIC2.55□□□□□ -2
HDAC3O15379 RNU2-66P-201ENST00000410650 161 ntBASIC2.55□□□□□ -2
HDAC3O15379 Y_RNA.619-201ENST00000410951 90 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms