Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.95□□□□□ -1.62
NFKB1P19838 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NFKB1P19838 RNU6-395P-201ENST00000365662 106 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 MTCYBP2-201ENST00000407745 171 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.95□□□□□ -1.62
NFKB1P19838 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.95□□□□□ -1.62
NFKB1P19838 MTCO3P29-201ENST00000432119 779 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 BX679664.1-201ENST00000434429 253 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 RPL29P29-201ENST00000448725 423 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.95□□□□□ -1.62
NFKB1P19838 AC087588.1-201ENST00000462203 316 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.95□□□□□ -1.62
NFKB1P19838 SNORA25.14-201ENST00000516481 132 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 AL590705.4-201ENST00000532209 134 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 HMGN2P6-201ENST00000551091 273 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 SNORA74C-1-201ENST00000580726 201 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.95□□□□□ -1.62
NFKB1P19838 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NFKB1P19838 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 AL451142.2-201ENST00000429076 2090 ntBASIC4.95□□□□□ -1.62
NFKB1P19838 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NFKB1P19838 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.95□□□□□ -1.62
NFKB1P19838 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 AC005332.5-201ENST00000591222 2919 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.94□□□□□ -1.62
NFKB1P19838 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 SNORD50.1-201ENST00000362987 71 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 Y_RNA.506-201ENST00000384494 102 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 MIR301A-201ENST00000385261 86 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 Y_RNA.581-201ENST00000391017 97 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL21P75-201ENST00000396599 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL21P28-201ENST00000401418 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 SNORD56-201ENST00000413522 71 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 RPL23AP27-201ENST00000415161 451 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AL590556.1-201ENST00000423231 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 EIF4HP2-201ENST00000424380 563 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 CKS1BP6-201ENST00000424932 240 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 AL590399.6-201ENST00000446396 307 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL21P11-201ENST00000461458 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL21P39-201ENST00000463605 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL7AP6-201ENST00000477943 801 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC132942.1-201ENST00000486753 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC093591.1-201ENST00000491435 481 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 RPL21P16-201ENST00000495531 483 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 RNU6-709P-201ENST00000517257 104 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 AC007458.1-201ENST00000542812 373 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 RN7SL435P-201ENST00000584418 282 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.94□□□□□ -1.62
NFKB1P19838 AC067852.4-201ENST00000590314 478 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.94□□□□□ -1.62
NFKB1P19838 OR7E18P-201ENST00000592589 702 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 AC107294.1-201ENST00000609524 467 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 SDR42E1P1-201ENST00000611327 477 ntBASIC4.94□□□□□ -1.62
NFKB1P19838 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NFKB1P19838 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NFKB1P19838 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.94□□□□□ -1.62
NFKB1P19838 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NFKB1P19838 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.93□□□□□ -1.62
NFKB1P19838 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NFKB1P19838 Y_RNA.33-201ENST00000362591 102 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RN7SKP104-201ENST00000362605 328 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-37P-201ENST00000362692 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNA5SP123-201ENST00000363244 119 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-11P-201ENST00000364234 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RN7SKP227-201ENST00000364445 330 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-7-201ENST00000364784 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNA5SP240-201ENST00000365355 128 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-8-201ENST00000365467 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-827P-201ENST00000365553 106 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-25P-201ENST00000383873 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-1-201ENST00000383898 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-36P-201ENST00000384172 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-4P-201ENST00000384205 107 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms