Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1aP25118 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1aP25118 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1aP25118 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Mir5130-201ENSMUST00000175160 84 ntBASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf1aP25118 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Gm13559-201ENSMUST00000120476 863 ntBASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1aP25118 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1aP25118 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms