Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.98□□□□□ -1.61
NFKB1P19838 AL442163.3-201ENST00000554110 156 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 BNIP3P5-201ENST00000562290 498 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 HNRNPCP4-201ENST00000571636 900 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 AC087783.2-201ENST00000605070 562 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AL022401.1-201ENST00000619498 108 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 AP002799.1-201ENST00000623552 423 ntBASIC4.98□□□□□ -1.61
NFKB1P19838 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NFKB1P19838 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NFKB1P19838 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NFKB1P19838 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 LINC02555-201ENST00000563933 1951 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NFKB1P19838 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 RN7SKP95-201ENST00000362860 303 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RNA5SP507-201ENST00000363603 121 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 U3.13-201ENST00000364804 214 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 Y_RNA.439-201ENST00000384119 94 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RNU6-125P-201ENST00000384505 107 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RPS29P13-201ENST00000402041 169 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RNU4-34P-201ENST00000410431 124 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RN7SKP213-201ENST00000410746 298 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
NFKB1P19838 OR2AH1P-201ENST00000425717 928 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC091286.1-201ENST00000431233 461 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC087650.1-201ENST00000431445 468 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC093414.1-201ENST00000434712 514 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.97□□□□□ -1.61
NFKB1P19838 AL445433.1-201ENST00000457507 257 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 snoU13.20-201ENST00000459180 104 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 AL359273.1-201ENST00000510918 627 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.97□□□□□ -1.61
NFKB1P19838 AC093023.1-201ENST00000547375 507 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 TRAV37-201ENST00000553906 342 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 MIR1273C-201ENST00000578669 77 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC006077.1-201ENST00000604746 343 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC009318.2-201ENST00000610917 651 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 AC004852.3-201ENST00000614131 326 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NFKB1P19838 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NFKB1P19838 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.97□□□□□ -1.61
NFKB1P19838 AP000542.2-201ENST00000623199 6179 ntBASIC4.97□□□□□ -1.61
NFKB1P19838 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NFKB1P19838 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.96□□□□□ -1.61
NFKB1P19838 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NFKB1P19838 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.96□□□□□ -1.62
NFKB1P19838 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NFKB1P19838 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.96□□□□□ -1.62
NFKB1P19838 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NFKB1P19838 UBE2L2-201ENST00000254302 429 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AC007685.1-201ENST00000329806 452 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NFKB1P19838 Y_RNA.16-201ENST00000362421 102 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RNA5SP305-201ENST00000362665 119 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RNU6-1159P-201ENST00000362933 107 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NFKB1P19838 SNORA36C-201ENST00000384289 132 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 SNORA70-201ENST00000384436 135 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.96□□□□□ -1.62
NFKB1P19838 AL606753.1-201ENST00000427435 87 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AL445305.1-201ENST00000432577 575 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.96□□□□□ -1.62
NFKB1P19838 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
NFKB1P19838 RNU7-120P-201ENST00000459334 63 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RPL23AP56-201ENST00000460778 453 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RN7SL808P-201ENST00000496066 299 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RN7SL591P-201ENST00000496150 292 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 Y_RNA.719-201ENST00000517156 106 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.96□□□□□ -1.62
NFKB1P19838 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
NFKB1P19838 SYF2P1-201ENST00000550658 413 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 AL157871.3-201ENST00000557231 293 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 MIR3936-201ENST00000584304 110 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.96□□□□□ -1.62
NFKB1P19838 AC010620.2-201ENST00000600135 313 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 U6.92-201ENST00000636464 89 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.96□□□□□ -1.62
NFKB1P19838 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NFKB1P19838 AC099654.2-201ENST00000433031 1980 ntBASIC4.96□□□□□ -1.62
NFKB1P19838 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NFKB1P19838 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NFKB1P19838 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NFKB1P19838 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.95□□□□□ -1.62
NFKB1P19838 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NFKB1P19838 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms