Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC245166.1-201ENST00000521012 253 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC125611.2-201ENST00000551907 647 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC234778.2-201ENST00000566241 354 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC097468.3-201ENST00000607956 456 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AF250324.2-201ENST00000608299 610 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 uc_338.25-201ENST00000613756 156 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX43Q9NXZ2 AC092447.10-201ENST00000620607 1652 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 RNU6-289P-201ENST00000364093 107 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 RNU6-1042P-201ENST00000384204 107 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 RNY3P14-201ENST00000384309 102 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AL356421.1-201ENST00000403255 413 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 CYCSP32-201ENST00000440548 321 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC244505.5-201ENST00000443639 207 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 ELOCP23-201ENST00000452014 332 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 LARP1BP2-201ENST00000486594 519 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC006445.1-201ENST00000491925 405 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 RNU6-506P-201ENST00000516553 94 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 MIR3913-1-201ENST00000577744 102 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 MIR4307-201ENST00000582802 84 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC112187.2-201ENST00000604345 283 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC103710.4-201ENST00000609301 899 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC131902.3-201ENST00000611767 581 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC091834.1-201ENST00000614543 472 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 U4.5-201ENST00000617137 123 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC093591.3-201ENST00000634516 308 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 AC006378.2-201ENST00000623178 2476 ntBASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX43Q9NXZ2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RNU5A-1-201ENST00000362698 116 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RNU6-744P-201ENST00000365557 107 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RNU6-1316P-201ENST00000384242 108 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 Y_RNA.554-201ENST00000384672 102 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 SNORA40.3-201ENST00000390964 122 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 OR4K11P-201ENST00000431829 904 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC109583.1-201ENST00000432156 268 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 MTND3P21-201ENST00000433774 331 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RSU1P2-202ENST00000437884 485 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AL671855.1-201ENST00000446875 1203 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 MTND1P9-201ENST00000453775 944 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 MTCO3P38-201ENST00000468910 766 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RPL31P60-201ENST00000478450 367 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 HMGB1P36-201ENST00000487709 576 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 RPL9P6-201ENST00000492764 598 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 SNORA31.22-201ENST00000517204 135 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AP004247.1-201ENST00000531556 1289 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AP002453.2-201ENST00000533503 320 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms