Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC246680.2-201ENST00000422106 389 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC079203.1-201ENST00000487972 404 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC004062.1-201ENST00000509926 645 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC048346.1-201ENST00000510247 144 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 ARL2BPP5-201ENST00000523141 481 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 ZNF705CP-201ENST00000530515 889 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL161670.1-201ENST00000554348 137 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 ACTR3BP3-201ENST00000565577 979 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL590282.1-201ENST00000610379 1136 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 ICE2P2-201ENST00000483823 2787 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC068700.1-201ENST00000565862 3754 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL136164.4-201ENST00000625013 2135 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 RNU6-481P-201ENST00000384194 107 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 MIR649-201ENST00000384843 97 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 MTCO2P31-201ENST00000402702 684 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AL096803.2-201ENST00000450032 677 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 MTCO3P2-201ENST00000457365 171 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 RPS29P1-201ENST00000465274 159 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC025768.1-201ENST00000510057 267 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 IGJP1-201ENST00000522682 475 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AP003049.1-201ENST00000529418 457 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
SHANK3Q9BYB0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 RNU6-619P-201ENST00000365146 108 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 SNORA51.6-201ENST00000384151 125 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 MT-TC-201ENST00000387405 66 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 MCTS2P-201ENST00000394552 546 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 DEFB130D-201ENST00000426866 237 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 RPL36P19-201ENST00000430744 301 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AL359273.1-201ENST00000510918 627 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 RNU6-1073P-201ENST00000517182 106 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC002487.1-201ENST00000604565 994 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC026741.1-201ENST00000605892 482 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC006249.1-201ENST00000621223 471 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 AC130650.2-201ENST00000618736 2403 ntBASIC2.1□□□□□ -2.07
SHANK3Q9BYB0 ZNF849P-201ENST00000594711 1566 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 SNORD65C-201ENST00000390962 71 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 RNA5SP56-201ENST00000410277 118 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC241584.1-201ENST00000438469 1241 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC104073.1-201ENST00000451988 151 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 VPS26AP1-201ENST00000483197 979 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 NCOR1P1-202ENST00000486162 291 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 RPS15AP36-201ENST00000492022 382 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 SEM1P1-201ENST00000506694 209 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC112518.2-201ENST00000508565 425 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC008628.1-201ENST00000508663 265 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC118282.2-201ENST00000508739 374 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 MTCO3P44-201ENST00000510977 541 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 SNORA31.8-201ENST00000516327 108 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AC015720.1-201ENST00000565251 277 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 SNORD84-203ENST00000584275 78 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AL020997.3-201ENST00000602843 359 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AL355810.1-201ENST00000614629 552 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AL590396.4-201ENST00000636779 956 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 AP002907.1-201ENST00000606361 1430 ntBASIC2.09□□□□□ -2.07
SHANK3Q9BYB0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SHANK3Q9BYB0 PABPC1P9-201ENST00000426076 1612 ntBASIC2.09□□□□□ -2.08
SHANK3Q9BYB0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHANK3Q9BYB0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
SHANK3Q9BYB0 AP002784.2-201ENST00000397300 549 ntBASIC2.08□□□□□ -2.08
SHANK3Q9BYB0 BX682237.1-201ENST00000415016 335 ntBASIC2.08□□□□□ -2.08
SHANK3Q9BYB0 BX664727.1-201ENST00000416024 466 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms