Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC131280.1-202ENST00000624067 4211 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC010889.1-201ENST00000566193 2666 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6-741P-201ENST00000383889 107 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA67.3-201ENST00000384366 140 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6-878P-201ENST00000384578 110 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL023284.1-201ENST00000403956 276 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL161449.1-201ENST00000414531 1199 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC093422.3-201ENST00000428506 305 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC005345.1-201ENST00000431868 217 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 MTCYBP45-201ENST00000435243 565 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 GTF2IP7-202ENST00000436677 309 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 RPL23AP6-201ENST00000446637 472 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 NDUFA5P7-201ENST00000452914 242 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 RPL7P18-201ENST00000478965 734 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 MTAPP1-201ENST00000489154 819 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 MIR3126-201ENST00000577443 74 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 MIR3162-201ENST00000581818 82 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AC007349.4-201ENST00000608114 532 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 DUXAP10-204ENST00000612052 616 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL773524.1-201ENST00000614065 229 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL445493.3-201ENST00000619568 477 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL162233.1-201ENST00000620014 944 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AP002791.1-201ENST00000623291 381 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 AL356473.1-201ENST00000406203 1408 ntBASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TRAV13-1A0A0B4J241 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA16.1-201ENST00000364597 132 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA23-201ENST00000365128 182 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA64-201ENST00000384674 134 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 HMGN2P39-201ENST00000398005 273 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 U6atac.2-201ENST00000408644 118 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 RNA5SP450-201ENST00000411206 102 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AL158823.1-201ENST00000418441 478 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 ZNF863P-201ENST00000426746 417 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 PSMA6P3-201ENST00000428242 164 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AL356320.1-201ENST00000429616 163 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 MED14P1-201ENST00000430517 648 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 RPL7P12-201ENST00000446719 750 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 HMGN1P5-201ENST00000448591 263 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 PPP1R2P5-201ENST00000457256 603 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 RPL31P50-201ENST00000471002 296 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 COX7A2P2-201ENST00000505291 250 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC022880.1-201ENST00000534017 973 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 HSBP1P1-201ENST00000555205 166 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC095057.3-201ENST00000567102 1157 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC068313.1-201ENST00000604028 1008 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC104307.1-201ENST00000616142 196 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AL158801.5-201ENST00000623123 465 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 AC005832.2-201ENST00000538921 1430 ntBASIC1.3□□□□□ -2.2
TRAV13-1A0A0B4J241 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 OR1L1-202ENST00000373686 1083 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA11-201ENST00000408789 128 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AL135786.1-201ENST00000415892 214 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 BX276092.3-201ENST00000424182 230 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 MTCO1P48-201ENST00000448024 1096 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AC087884.1-201ENST00000469738 328 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AC093281.2-201ENST00000510153 597 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 RNA5SP137-201ENST00000516833 135 ntBASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV13-1A0A0B4J241 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms